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Table 3 Markers significant for Z-test and/or Chi-square (CS): P-values for Z-test, CS and interval analysis (IA)

From: Mapping QTL affecting resistance to Marek's disease in an F6 advanced intercross population of commercial layer chickens

Marker Chromosome Pos Z CS IA Type
MCW0106 1 94 0.60 0.00 0.02 C
ADL1245 1 245 0.00 0.00§ 0.99 Z
ADL1248 1 248 -0.02 0.63 0.93  
LEI0217 1 299 -0.03 0.00 0.14 ZC
HYL0238 2 45 -0.48 0.04 0.10 C
*ADL0270 2 46 -0.35 0.14 0.11  
ADL0270r 2 46 -0.25 0.01 0.11 C
HYL0247 2 54 -0.98 0.01 0.11  
MCW0063 2 119 0.01 0.67 0.62 Z
MCW0239 2 126 0.00 0.28 0.38 Z
ADL0157r 2 245 0.09 0.01 0.46 C
MCW0257 2 272 0.18 0.00 0.02 C
MCW0257r 2 272 0.15 0.00 0.02 C
*MCW0288 2 277 0.61 0.19 0.19  
MCW0288r 2 277 0.40 0.01 0.19 C
MCW0051 2 358 0.02 0.03 0.02 ZC
MCW0051r 2 358 0.04 0.00 0.02 C
ADL2361 2 361 0.01 0.00 0.00 ZC
*MCW0245 2 364 0.11 0.10 0.03 C
MCW0245r 2 364 0.01 0.00 0.03 ZC
*ADL2374 2 374 0.04 0.82 0.61  
MCW0282 2 378 0.01 0.29 0.17 Z
MCW0282r 2 378 0.00 0.09 0.17 Z
CPPP 3 292 0.00 0.05 0.22 ZC
MCW0005 4 75 0.26 0.01 0.30  
*UMA4027 4 137 -0.12 0.26 0.18  
UMA4027r 4 137 -0.07 0.03 0.18 C
*HYL0437 4 138 -0.14 0.09 0.17  
HYL0449 4 144 -0.43 0.01 0.10 C
HYL0515 5 31 0.27 0.03§ 1.00  
*ADL0292 5 83 -0.04 0.18 0.20  
*ROS0052 5 90 -0.05 0.63 0.55  
MCW0078 5 93 0.00 0.03 0.11 Z
*ADL0312 5 95 -0.06 0.52 0.39  
ADL0023 5 96 -0.02 0.29 0.34 Z
MCW0081 5 152 -0.02 0.00 0.00 ZC
MCW0081r 5 152 -0.01 0.00 0.00 ZC
ADL0166 5 162 0.03 0.00 0.00 ZC
ADL0166r 5 162 0.02 0.00 0.00 ZC
ADL0298 5 198 0.02 0.00 0.11 ZC
ADL0298r 5 198 0.37 0.00 0.11 C
MCW0305 8 15 -0.70 0.00§ 0.97  
HYL8003 8 40 0.00 0.00 0.47 ZC
HYL8033 8 59 -0.02 0.42 0.53 Z
ROS0307 8 96 0.42 0.00§ 0.99  
LEI0028r1 9 51 0.50 0.03§ 0.65  
LMU00061 9 51 -0.97 0.00§ 0.65  
*HYL09281 9 55 -0.22 0.33 0.92  
LEI01971 9 56 0.14 0.03§ 0.91  
LEI0197r1 9 56 0.00 0.00§ 0.91 Z
ADL0259 9 122 -0.01 0.00 0.00 ZC
MCW0244 13 16 0.04 0.03 0.37 C
MCW00521 15 26 0.10 0.01§ 0.63  
HYL1808 18 23 0.00 0.00 0.01 ZC
MCW0217 18 24 -0.07 0.03 0.01 C
MCW0217r 18 24 -0.06 0.02 0.01 C
*HYL1809 18 26 -0.04 0.07 0.03  
HYL1816 18 32 -0.09 0.00 0.22 C
MCW0209 26 36 -0.15 0.03 0.28  
*HYL2612 26 66 0.15 0.10 0.09  
LEI0074 26 67 0.55 0.00 0.08 C
LEI0074r 26 67 0.26 0.04 0.08 C
ADL2668 26 68 0.64 0.00 0.01 C
*ADL2669 26 68 0.92 0.82 0.01  
*ADL2669r 26 68 0.24 0.00 0.01 C
*ROS0309 Z 36 0.12 0.75 0.86  
MCW0055 Z 37 0.00 0.01§ 0.63 Z
MCW0258 Z 42 0.02 0.24 0.81 Z
MCW0331 Z 43 0.02 0.11 0.86 Z
*ROS0301 Z 49 0.09 0.92 1.00  
ADL0273 Z 52 0.33 0.01§ 0.53  
MCW0241 Z 74 0.01 0.00§ 0.50 Z
MCW0227 Z 87 -0.23 0.03 0.24 C
LEI0121 Z 97 0.50 0.01 0.26 C
LPL Z 103 0.59 0.00 0.03 C
  1. 1These markers were significant for CS, but were not supported by IA. They are included in the list of QTLR, because they corresponded to QTLR previously mapped by [18].
  2. PFP thresholds: Z, 0.028; CS, 0.048; *, Non-significant but part of a linked series of significant markers defining a QTLR; Italics, markers not included in final count of QTLR because significant only for a single test and marker; §, CS not supported by IA; Type, tests for which marker is significant; r at the end of a marker name represents a repeat test of the same marker; Spaces between rows delineate the individual QTLR.