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Table 4 Comparison of gg2v3 and FGC07 catalog by overlap interval analysis

From: Improving Gene-finding in Chlamydomonas reinhardtii:GreenGenie2

Complete FGC07 models

Incomplete FGC07 models

Type of overlap

Count

Type of overlap

Count

Exact Overlap

1,324

Exact Overlap

0

Partial Overlap

5,425

Partial Overlap

2,826

No Overlap

1,574

No Overlap

1,149

Other

16

Other

16

Total

8,339

Total

3,981

  1. Complete model: Any model that includes a starting ATG gene feature and terminates with a stop codon (TAA, TAG or TGA).
  2. Incomplete model: Any model that lacks a start or stop codon or both.
  3. Other: Models that interlaced overlaps and concatenated exact overlaps.
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BMC Genomics

ISSN: 1471-2164

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