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Table 2 Regulated genes identified in the SSH libraries of thermal exposed Paralvinella pandorae irlandei with significant database matches (E-value above 0.005).

From: Molecular identification of differentially regulated genes in the hydrothermal-vent species Bathymodiolus thermophilus and Paralvinella pandorae in response to temperature

Homolog (protein); Blastx value

Homolog Species

Insert size (bp)

Accession number

SSH library

Respiratory chain

Cytochrome c oxidase subunit I; 1e-73

Littorina saxatilis

772

GH196478

reverse

Cytochrome oxidase subunit II; 1e-46

Lumbricus terrestris

715

GH196499

reverse

Cytochrome c oxidase subunit III; 2e-34

Albula glossodonta

457

GH196480

reverse

Cytochrome c oxidase polypeptide Va; 1e-20

Strongylocentrotus purpuratus

149

GH196490

reverse

Ubiquinol-cytochrome c reductase complex; 4e-23

Mus musculus

537

GH196502

reverse

Cytochrome b; 1e-23

Urechis caupo

258

GH196495

reverse

NADH dehydrogenase subunit 1; 4e-48

Urechis caupo

571

GH196493

reverse

NADH dehydrogenase subunit 6; 7e-05

Clymenella torquata

190

GH196501

reverse

Sulfur and oxygen transport

Hemoglobin A2c chain; 3e-31

Arenicola marina

569

GH196487

reverse

Hemoglobin B1 chain precursor; 4e-21

Arenicola marina

326

GH196479

reverse

Hemoglobin B2 chain; 1e-12

Arenicola marina

516

GH196491

reverse

Hemoglobin linker LY precursor; 5e-86

Riftia pachyptila

529

GH196505

reverse

Extracellular globin linker L1 precursor; 0.002

Alvinella pompejana

335

GH196504

reverse

Hemoglobin linker L2 precursor; 0.005

Alvinella pompejana

727

GH196483

forward

Intracellular hemoglobin; 5e-41

Alvinella pompejana

547

GH196492

forward

Metabolism

Trypsin; 6e-60

Litopenaeus vannamei

661

GH196494

reverse

S-adenosylhomocysteine hydrolase; 2e-66

Branchiostoma v

529

GH196476

forward

Cell communication, membrane receptors, immune system

Lipid binding protein 9; 5e-05

Caenorhabditis elegans

463

GH196481

forward

GTP-binding protein (rab7); 7e-89

Canis familiaris

641

GH196489

forward

Xylan endohydrolase isoenzyme, 6e-22

Arabidopsis thaliana

455

GH196472

reverse

Cyclophilin B; 4e-14

Gallus gallus

384

GH196477

reverse

Cytoskeleton production and maintenance

Chymotrysin; 4e-11

Lumbricus rubellus

230

GH196484

forward

Secreted nidogen domain protein; 4e-08

Strongylocentrotus purpuratus

325

GH196473

forward

Actin A1; 2e-35

Haliotis iris

541

GH196475

forward

Ribosomal proteins

Ribosomal protein L5; 3e-58

Rattus norvegicus

423

GH196497

reverse

Ribosomal protein L28; 6e-07

Haliotis asinina

262

GH196486

reverse

Ribosomal protein L24; 1e-38

Danio rerio

439

GH196482

forward

Ribosomal protein S3; 3e-30

Crassostrea gigas

205

GH196474

forward

Ribosomal protein S16; 2e-41

Gallus gallus

337

GH196500

forward

Ribosomal protein SA; 8e-43

Xenopus tropicalis

514

GH196496

forward

Ribosomal protein P1; 2e-11

Drosophila yakuba

444

GH196498

forward

Unknown function

CG14235-PA, isoform A; 1e-27

Tribolium castaneum

483

GH196488

forward

CBG19860; 2e-08

Caenorhabditis briggsae

266

GH196485

reverse

Unidentified sequences

50 sequences

  

GH196507 to GH196554

  1. Forward: genes over-expressed at 10°C versus 20°C; Reverse: genes over- expressed at 20°C versus 10°C.