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Table 1 PWMs associated with patient survival in breast cancer.

From: Systematic identification of transcription factors associated with patient survival in cancers

PWM

TF

Correlation

q-value

PWM

TF

Correlation

q-value

V$PR_02

PR

-0.46

0.00096

V$GRE_C

GR

-0.37

0.0051

V$E2F_03

E2F

-0.43

0.0012

V$SRF_Q5_01

SRF

-0.36

0.0060

V$CREBP1_Q2

CRE-BP1

-0.44

0.0013

V$HELIOSA_02

Helios

-0.35

0.0077

V$AR_02

AR

-0.41

0.0017

V$CREBATF_Q6

CREBATF

-0.35

0.0078

V$GR_01

GR

-0.40

0.0017

V$AR_01

AR

-0.35

0.0079

V$PAX3_B

PAX3

-0.41

0.0019

V$TAACC_B

Lentiviral

-0.35

0.0080

V$PR_01

PR

-0.41

0.0019

V$NFY_01

NF-Y

-0.34

0.0095

V$CREB_Q4

CREB

-0.40

0.0022

V$LXR_DR4_Q3

LXR

0.37

0.0090

V$AR_03

AR

-0.38

0.0033

V$S8_01

S8

0.39

0.0049

V$ATF4_Q2

ATF4

-0.39

0.0033

V$PAX9_B

PAX9

0.44

0.0015

V$OCT1_B

OCT1

-0.38

0.0037

V$MAF_Q6

MAF

0.40

0.0038

V$CHX10_01

CHX10

-0.37

0.0046

V$CEBPDELTA_Q6

C/EBPdelta

0.39

0.0055

V$CEBP_C

C/EBP

-0.37

0.0047

V$HNF3_Q6

HNF-3

0.40

0.0056

  1. The table includes 20 negative and 6 positive PWM predictors that are significantly associated with patient survival at the 1% FDR. Correlation is based on the Spearman correlation coefficient between PWM activity and patient survival.