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Table 1 Top 10 differentially expressed genes at 3dpe

From: Gene expression profiling of intestinal regeneration in the sea cucumber

Top

Gene ID

Lib.

BlastX*

ESTs

Exp.

logFC

P.Value

1

Contig 4863-1_

  

2

↑

5.541468

8.44E-11

2

ES726635

7d

 

s

↑

5.527128

6.06E-11

3

Contig 5300-1_

  

5

↑

4.879511

4.76E-10

4

Contig 3933-1_

  

2

↑

4.774727

3.03E-10

5

Contig 4702-1_

  

2

↑

3.091996

1.48E-10

6

Contig 798-1_

  

2

↑

3.080896

3.25E-11

7

ES725559

3d

 

s

↑

3.025192

1.2E-10

8

ES729465

N

TUBULIN A-1

s

↑

2.800781

5.86E-10

9

Contig 5344-1_

 

Cyclophilin

9

↑

2.797244

4.89E-10

10

ES725084

3d

 

s

↑

2.767621

5.84E-10

1

ES725883

7d

 

s

↓

-8.96457

1.67E-12

2

Contig 4571-1_

  

5

↓

-8.50941

1.83E-10

3

Contig 2794-1

  

2

↓

-7.88611

1.01E-14

4

ES728818

N

 

s

↓

-7.12955

1.32E-11

5

ES729355

N

 

s

↓

-6.66512

5.6E-10

6

ES729268

N

 

s

↓

-6.41638

1.32E-11

7

Contig 2489-1_

  

2

↓

-6.37315

1.7E-11

8

ES728532

N

 

s

↓

-6.18883

4E-10

9

Contig 5141-2_

  

6

↓

-6.17227

3.31E-10

10

Contig 5092-1_

  

2

↓

-6.00316

1.15E-10

  1. Lib = cDNA library; FC = Fold Change; ↑: Up-regulated; ↓: Down-regulated; s:Singlet. *BlastX cut-off (1e-7)