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Table 6 Significant biological processes and pathways discerning isomers and from an early toxic response

From: Discernment of possible mechanisms of hepatotoxicity via biological processes over-represented by co-expressed genes

Identifier

Term

p-value

Up-regulated

  

GO:0009611

response to wounding

5.10E-05

GO:0001525

angiogenesis

6.07E-04

GO:0002376

immune system process

1.29E-03

GO:0009605

response to external stimulus

1.33E-03

GO:0007596

blood coagulation

3.19E-03

GO:0042730

fibrinolysis

3.56E-03

GO:0006954

inflammatory response

3.96E-03

GO:0030595

leukocyte chemotaxis

4.83E-03

GO:0006935

chemotaxis

4.94E-03

GO:0030195

negative regulation of blood coagulation

6.00E-03

GO:0006873

cellular ion homeostasis

6.72E-03

GO:0042127

regulation of cell proliferation

9.24E-03

rno04660

T cell receptor signaling pathway

2.91E-02

rno04810

Regulation of actin cytoskeleton

3.33E-02

rno04520

Adherens junction

4.58E-02

rno04620

Toll-like receptor signaling pathway

5.95E-02

Down-regulated

  

GO:0005975

carbohydrate metabolic process

1.89E-04

GO:0032787

monocarboxylic acid metabolic process

1.06E-03

GO:0005978

glycogen biosynthetic process

1.82E-03

GO:0006066

alcohol metabolic process

2.09E-03

GO:0000271

polysaccharide biosynthetic process

5.09E-03

GO:0019318

hexose metabolic process

5.68E-03

GO:0042593

glucose homeostasis

6.71E-03

GO:0019752

carboxylic acid metabolic process

8.06E-03

GO:0006094

gluconeogenesis

8.54E-03

rno04910

Insulin signaling pathway

4.10E-02

rno00030

Pentose phosphate pathway

9.79E-02

Early response

  

GO:0006469

negative regulation of protein kinase activity

3.82E-06

GO:0016070

RNA metabolic process

3.88E-04

GO:0006355

regulation of transcription, DNA-dependent

4.35E-04

GO:0012501

programmed cell death

6.37E-04

GO:0032774

RNA biosynthetic process

7.12E-04

GO:0031323

regulation of cellular metabolic process

1.27E-03

GO:0045941

positive regulation of transcription

4.03E-03

GO:0030154

cell differentiation

5.41E-03

GO:0006366

transcription from RNA polymerase II promoter

9.35E-03

rno04010

MAPK signaling pathway

2.17E-04

rno04012

ErbB signaling pathway

2.60E-02

rno04912

GnRH signaling pathway

2.67E-02