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Figure 2 | BMC Genomics

Figure 2

From: 7TMRmine: a Web server for hierarchical mining of 7TMR proteins

Figure 2

7TMRmine hierarchical analysis options. The hierarchical analysis process is highly customizable (A). The user options include the number of levels, the filtering logic ('AND' or 'OR'), and the combination of classifiers at each level. For the TM predictions, further options are available, including the TM number range and the location of N-terminus ('in' or 'out'). The two filtering logics are used to identify 'positive' proteins (B). 'AND' logic identifies a protein as a positive if all classifiers identify it as a positive (the intersection), otherwise as negatives. 'OR' logic identifies a protein as a positive if at least one classifier identifies it as a positive (the union), otherwise as negatives. Only positively identified proteins are passed to the next level for further analysis.

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