Table 2 Predicted protein-protein interactions

Yeast

4662

175322

Yeast CC5

1182

9384

Yeast BP5+PCC 0.3

1249

8986

Yeast BP8

290

1336

Yeast total filtered

1919

16145

Human

3346

28397

Human CC5

694

1821

Human BP5+PCC 0.3

632

1082

Human BP8

185

421

Human total filtered

1089

2795

C. elegans

1549

4174

C. elegans CC5

149

199

C. elegans BP5+PCC 0.3

234

256

C. elegans BP8

70

100

C. elegans total filtered

330

432

Drosophila

3355

19315

Drosophila CC5

430

924

Drosophila BP5+PCC0.3

368

438

Drosophila BP8

87

140

Drosophila total filtered

646

1282

All species – Interologs with CC annotation (CC > = 5)

2123 (1431)

43698 (11891)

All species – Interologs with BP annotation (BP > = 5, BP > = 8)

3087 (2111, 416)

79475 (25037, 1890)

All species – Interologs with gene expression data (PCC > = 0.3)

5369 (4688)

161928 (62178)

All species – Filtered

2233

18674

All species – Predicted

3014

51885

All species – interologs (without filtering)

6206

216972