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Table 1 Robustness of the GPlex4 and REPLI-g WGA kits.

From: Genome-wide scans using archived neonatal dried blood spot samples

ID

GPlex4

REPLI-g

 

Call-rate A1

Call-rate B2

WGAout3

Call-rate A1

Call-rate B2

WGAout3

1

97.74%

99.24%

4.86

99.42%

99.65%

6.55

2

97.41%

99.30%

4.85

99.56%

99.64%

7.22

3

98.21%

99.42%

5.06

98.54%

99.33%

3.53

4

97.80%

99.38%

4.93

99.14%

99.56%

3.00

5

97.90%

99.41%

5.20

99.00%

99.51%

4.47

6

98.04%

99.42%

4.92

99.73%

99.73%

3.74

7

97.83%

99.38%

5.00

99.72%

99.73%

6.02

8

97.62%

99.29%

5.01

99.49%

99.66%

6.00

9

97.56%

99.29%

5.15

99.55%

99.64%

7.64

10

97.30%

99.26%

5.33

95.91%

99.15%

7.86

11

98.17%

99.32%

5.41

99.43%

99.60%

7.48

12

98.13%

99.38%

5.49

99.38%

99.56%

1.56

13

96.62%

99.08%

5.15

99.43%

99.60%

6.71

14

97.55%

99.35%

5.48

99.22%

99.63%

1.40

15

96.75%

99.17%

5.14

98.97%

99.53%

4.98

16

96.53%

99.16%

4.13

98.49%

99.43%

2.72

Median

97.68%

99.31%

5.10

99.40%

99.60%

5.49

Std. Dev.

0.53%

0.10%

0.33

0.92%

0.15%

2.18

  1. 1Call-rate (percent) using the Illumina Human610-Quadv1B cluster file.
  2. 2Call-rate (percent) using the WGA kit custom cluster file.
  3. 3wgaDNA (μg) produced per reaction.