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Table 4 Comparative genomics of P. luminescens vs. P. asymbiotica ATCC43949 showing regions unique to each genome

From: Comparative genomics of the emerging human pathogen Photorhabdus asymbiotica with the insect pathogen Photorhabdus luminescens

Locus Species Gene Region Size (Kb) Products of interest
1 P. luminescens plu0179-plu0190 8.5 Carbapenem biosynthesis operon
2 P. luminescens plu0404-plu0419 14.3 Fimbrial proteins, adhesin
3 P. luminescens plu0525-plu0541 16 Hemolysins
4 P. luminescens plu0545-plu0549 16.6 Hemolysins
5 P. luminescens plu0634-plu0643 14.2 Hemolysins, peptidase
6 P. luminescens plu0751-plu0767 20 Proteins involved in antibiotic synthesis
7 P. luminescens plu0777-plu0793 18 Fimbrial proteins
8 P. luminescens plu0802-plu0808 12.8 Tc Insecticidal toxins
9 P. luminescens plu0887-plu0900 20.7 Pyocins, proteins involved in antibiotic synthesis
10 P. luminescens plu0917-plu0925 8 Lux-R transcriptional regulators
11 P. luminescens plu0961-plu0968 29 Tc Insecticidal toxins
12 P. luminescens plu0991-plu0994 3.7 Adhesin
13 P. luminescens plu1030-plu1059 27.6 Pili operon
14 P. luminescens plu1063-plu1113 51 Peptide synthetase, phage, transposable elements
15 P. luminescens plu1204-plu1224 29.6 Proteins involved in antibiotic synthesis, transposable elements
16 P. luminescens plu1408-plu1413 6.7 Hemolysins
17 P. luminescens plu1514-plu1515 2.2 Proteins involved in tetracycline resistance
18 P. luminescens plu1536-plu1537 1.3 Similar to Bt Insecticidal toxin
19 P. luminescens plu2188-plu2200 14.1 Proteins involved in antibiotic synthesis
20 P. luminescens plu2213-plu2223 15.3 Nematicidal protein
21 P. luminescens plu2903-plu2960 33.6 Phage
22 P. luminescens plu3124-plu3129 6.2 Proteins involved in toxin secretion
23 P. luminescens plu3423-plu3489 47.5 Phage
24 P. luminescens plu3520-plu3535 46.5 Proteins involved in antibiotic synthesis
25 P. luminescens plu3667-plu3669 2.4 RTX toxins
26 P. luminescens plu3915-plu3925 13 Proteins involved in antibiotic synthesis
27 P. luminescens plu4165-plu4175 15.3 Tc Insecticidal toxins TccB1, TccA1, pyocins
28 P. luminescens plu4182-plu4186 9.1 Tc Insecticidal toxins TccC6
29 P. luminescens plu4187-plu4197 11.4 Anthraquinone biosynthesis
30 P. luminescens plu4234-plu4243 10.5 Photopexin A & B
31 P. luminescens plu4488 2.8 Insecticidal toxins TccC7
32 P. luminescens plu4621-plu4630 14.6 Siderophore biosynthesis operon
33 P. luminescens plu4812-plu4830 17.1 Lipopolysaccharide biosynthesis
34 P. asymbiotica pau00446-pau00458 21.2 Hemolysin, Proteins involved in antibiotic synthesis
35 P. asymbiotica pau00704-pau00699 8.3 Fucose operon
36 P. asymbiotica pau00881-pau00897 23.6 Tc Insecticidal toxin TccC3
37 P. asymbiotica pau00911-pau00921 18.7 Fatty acid biosynthesis operon
38 P. asymbiotica pau01194-pau01201 16.8 Proteins involved in antibiotic synthesis
39 P. asymbiotica pau01335-pau01351 20.1 RTX toxins
40 P. asymbiotica pau02124-pau02142 16.3 Insecticidal toxin TccZ
41 P. asymbiotica pau02212-pau02264 88.7 Syringomycin synthetase, insecticidal toxin, lectin
42 P. asymbiotica pau02551 4.6 Similar to syringomycin synthetase
43 P. asymbiotica pau04327-pau04342 18.3 Lipopolysaccharide biosynthesis