Table 1 Genes down-regulated in the total RNA fraction in the presence of HTLV-I p30
Probe ID | Gene Description | Gene | Fold Change |
|---|---|---|---|
| Â | Transcription/Translation/RNA Processing | Â | Â |
1554468_s_at | Mitochondrial Ribosomal Protein L38 | FBF1 | 0.11 |
217340_at | Ribosomal Protein L21 | RPL21 | 0.16 |
231658_x_at | Similar to Ribosomal Protein L36 | LOC127295 | 0.19 |
243560_at | Heat Shock Transcription Factor 1 | HSF1 | 0.24 |
216282_x_at | Polymerase (RNA) II (DNA Directed) Polypeptide C, 33 kda | POLR2C | 0.25 |
236522_at | Nuclear Factor I/A | NFIA | 0.27 |
1553181_at | DEAD (Asp-Glu-Ala-Asp) Box Polypeptide 31 | DDX31 | 0.27 |
216117_at | Exosome Component 2 | EXOSC2 | 0.32 |
208345_s_at | Pou Domain, Class 3, Transcription Factor 1 | POU3F1 | 0.37 |
1552499_a_at | Zinc Finger Protein 31 (Kox 29) | ZSCAN20 | 0.38 |
| Â | Metabolism | Â | Â |
1569631_at | Nicotinamide Nucleotide Adenylyltransferase 1 | NMNAT1 | 0.05 |
217203_at | Glutamate-Ammonia Ligase (Glutamine Synthetase) | GLUL | 0.09 |
226209_at | NADH Dehydrogenase (Ubiquinone) Flavoprotein 3, 10 kda | NDUFV3 | 0.16 |
239333_x_at | Glutathione S-Transferase Subunit 13 Homolog | GSTK1 | 0.31 |
226947_at | Glucuronidase, Beta-Like 2 | GUSBL2 | 0.34 |
213935_at | Abhydrolase Domain Containing 5 | ABHD5 | 0.35 |
238724_at | 2,3-Bisphosphoglycerate Mutase | BPGM | 0.37 |
213582_at | ATPase, Class VI, Type 11a | ATP11A | 0.38 |
236018_at | Adenosine Deaminase-Like | ADAL | 0.40 |
| Â | Signal Transduction | Â | Â |
1555340_x_at | Rap1a, Member Of Ras Oncogene Family | RAP1A | 0.00 |
218711_s_at | Serum Deprivation Response (Phosphatidylserine Binding Protein) | SDPR | 0.05 |
210374_x_at | Prostaglandin E Receptor 3 (Subtype Ep3) | PTGER3 | 0.12 |
216979_at | Nuclear Receptor Subfamily 4, Group A, Member 3 | NR4A3 | 0.13 |
242875_at | Presenilin 1 (Alzheimer Disease 3) | PSEN1 | 0.13 |
204936_at | Mitogen-Activated Protein Kinase Kinase Kinase Kinase 2 | MAP4K2 | 0.25 |
211471_s_at | Rab36, Member Ras Oncogene Family | RAB36 | 0.28 |
215134_at | Phosphatidylinositol 4-Kinase Type Ii | PI4K2A | 0.33 |
219738_s_at | Protocadherin 9 | PCDH9 | 0.35 |
239202_at | Rab3b, Member Ras Oncogene Family | RAB3B | 0.36 |
205280_at | Glycine Receptor, Beta | GLRB | 0.37 |
209101_at | Connective Tissue Growth Factor | CTGF | 0.37 |
| Â | Cell Division/Cell Cycle | Â | Â |
227578_at | Thymopoietin | TMPO | 0.15 |
219831_at | Cyclin-Dependent Kinase-Like 3 | CDKL3 | 0.29 |
| Â | Cytoskeleton | Â | Â |
239067_s_at | Pannexin 2 | PANX2 | 0.16 |
206117_at | Tropomyosin 1 (Alpha) | TPM1 | 0.31 |
205328_at | Claudin 10 | CLDN10 | 0.33 |
| Â | Transport | Â | Â |
216504_s_at | Solute Carrier Family 39 (Zinc Transporter), Member 8 | SLC39A8 | 0.11 |
242554_at | Two Pore Segment Channel 2 | TPCN2 | 0.40 |
| Â | Apoptosis | Â | Â |
202730_s_at | Programmed Cell Death 4 (Neoplastic Transformation Inhibitor) | PDCD4 | 0.34 |
211603_s_at | Ets Variant Gene 4 (E1A Enhancer Binding Protein, E1af) | ETV4 | 0.34 |
244035_at | B-Cell Cll/Lymphoma 2 | BCL2 | 0.36 |
| Â | Ubiquitin | Â | Â |
241900_at | Smad Specific E3 Ubiquitin Protein Ligase 2 | SMURF2 | 0.20 |
243216_x_at | Ubiquitin Specific Peptidase 40 | USP40 | 0.38 |
| Â | Other/Unknown | Â | Â |
233351_at | DNAI (Hsp40) Homolog, Subfamily C, Member 3 | DNAJC3 | 0.08 |
243221_at | Family With Sequence Similarity 20, Member A | FAM20A | 0.08 |
236378_at | Calcium And Integrin Binding Family Member 4 | CIB4 | 0.09 |
222109_at | Guanine Nucleotide Binding Protein-Like 3 (Nucleolar)-Like | GNL3L | 0.09 |
243989_at | Ku-Mel-3 Protein | KU-MEL-3 | 0.13 |
221225_at | Dephospho-Coa Kinase Domain Containing | DCAKD | 0.13 |
229678_at | Male-Enhanced Antigen 1 | MEA1 | 0.15 |
1552430_at | WD Repeat Domain 17 | WDR17 | 0.24 |
211113_s_at | ATP-Binding Cassette, Sub-Family G (White), Member 1 | ABCG1 | 0.28 |
207408_at | Solute Carrier Family 22 (Organic Cation Transporter), Member 14 | SLC22A14 | 0.30 |
233532_x_at | Intraflagellar Transport 52 Homolog (Chlamydomonas) | IFT52 | 0.34 |
214181_x_at | Leukocyte-Specific Transcript 1 | LST1 | 0.35 |
203404_at | Armadillo Repeat Containing, X-Linked 2 | ARMCX2 | 0.36 |
203765_at | Grancalcin, Ef-Hand Calcium Binding Protein | GCA | 0.36 |
1555046_at | FSH Primary Response (Lrpr1 Homolog, Rat) 1 | CENPI | 0.37 |
235991_at | CUB Domain Containing Protein 2 | CDCP2 | 0.37 |
1554112_a_at | Unc-51-Like Kinase 2 (C. Elegans) | ULK2 | 0.37 |
235349_at | Family With Sequence Similarity 82, Member A | FAM82A | 0.38 |
206928_at | Zinc Finger Protein 124 (Hzf-16) | ZNF124 | 0.39 |
236943_at | Lymphocyte Antigen 86 | LY86 | 0.39 |
242996_at | Mitochondrial Translational Release Factor 1 | MTRF1 | 0.40 |