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Table 1 Genes down-regulated in the total RNA fraction in the presence of HTLV-I p30

From: Genome wide analysis of human genes transcriptionally and post-transcriptionally regulated by the HTLV-I protein p30

Probe ID Gene Description Gene Fold Change
  Transcription/Translation/RNA Processing   
1554468_s_at Mitochondrial Ribosomal Protein L38 FBF1 0.11
217340_at Ribosomal Protein L21 RPL21 0.16
231658_x_at Similar to Ribosomal Protein L36 LOC127295 0.19
243560_at Heat Shock Transcription Factor 1 HSF1 0.24
216282_x_at Polymerase (RNA) II (DNA Directed) Polypeptide C, 33 kda POLR2C 0.25
236522_at Nuclear Factor I/A NFIA 0.27
1553181_at DEAD (Asp-Glu-Ala-Asp) Box Polypeptide 31 DDX31 0.27
216117_at Exosome Component 2 EXOSC2 0.32
208345_s_at Pou Domain, Class 3, Transcription Factor 1 POU3F1 0.37
1552499_a_at Zinc Finger Protein 31 (Kox 29) ZSCAN20 0.38
  Metabolism   
1569631_at Nicotinamide Nucleotide Adenylyltransferase 1 NMNAT1 0.05
217203_at Glutamate-Ammonia Ligase (Glutamine Synthetase) GLUL 0.09
226209_at NADH Dehydrogenase (Ubiquinone) Flavoprotein 3, 10 kda NDUFV3 0.16
239333_x_at Glutathione S-Transferase Subunit 13 Homolog GSTK1 0.31
226947_at Glucuronidase, Beta-Like 2 GUSBL2 0.34
213935_at Abhydrolase Domain Containing 5 ABHD5 0.35
238724_at 2,3-Bisphosphoglycerate Mutase BPGM 0.37
213582_at ATPase, Class VI, Type 11a ATP11A 0.38
236018_at Adenosine Deaminase-Like ADAL 0.40
  Signal Transduction   
1555340_x_at Rap1a, Member Of Ras Oncogene Family RAP1A 0.00
218711_s_at Serum Deprivation Response (Phosphatidylserine Binding Protein) SDPR 0.05
210374_x_at Prostaglandin E Receptor 3 (Subtype Ep3) PTGER3 0.12
216979_at Nuclear Receptor Subfamily 4, Group A, Member 3 NR4A3 0.13
242875_at Presenilin 1 (Alzheimer Disease 3) PSEN1 0.13
204936_at Mitogen-Activated Protein Kinase Kinase Kinase Kinase 2 MAP4K2 0.25
211471_s_at Rab36, Member Ras Oncogene Family RAB36 0.28
215134_at Phosphatidylinositol 4-Kinase Type Ii PI4K2A 0.33
219738_s_at Protocadherin 9 PCDH9 0.35
239202_at Rab3b, Member Ras Oncogene Family RAB3B 0.36
205280_at Glycine Receptor, Beta GLRB 0.37
209101_at Connective Tissue Growth Factor CTGF 0.37
  Cell Division/Cell Cycle   
227578_at Thymopoietin TMPO 0.15
219831_at Cyclin-Dependent Kinase-Like 3 CDKL3 0.29
  Cytoskeleton   
239067_s_at Pannexin 2 PANX2 0.16
206117_at Tropomyosin 1 (Alpha) TPM1 0.31
205328_at Claudin 10 CLDN10 0.33
  Transport   
216504_s_at Solute Carrier Family 39 (Zinc Transporter), Member 8 SLC39A8 0.11
242554_at Two Pore Segment Channel 2 TPCN2 0.40
  Apoptosis   
202730_s_at Programmed Cell Death 4 (Neoplastic Transformation Inhibitor) PDCD4 0.34
211603_s_at Ets Variant Gene 4 (E1A Enhancer Binding Protein, E1af) ETV4 0.34
244035_at B-Cell Cll/Lymphoma 2 BCL2 0.36
  Ubiquitin   
241900_at Smad Specific E3 Ubiquitin Protein Ligase 2 SMURF2 0.20
243216_x_at Ubiquitin Specific Peptidase 40 USP40 0.38
  Other/Unknown   
233351_at DNAI (Hsp40) Homolog, Subfamily C, Member 3 DNAJC3 0.08
243221_at Family With Sequence Similarity 20, Member A FAM20A 0.08
236378_at Calcium And Integrin Binding Family Member 4 CIB4 0.09
222109_at Guanine Nucleotide Binding Protein-Like 3 (Nucleolar)-Like GNL3L 0.09
243989_at Ku-Mel-3 Protein KU-MEL-3 0.13
221225_at Dephospho-Coa Kinase Domain Containing DCAKD 0.13
229678_at Male-Enhanced Antigen 1 MEA1 0.15
1552430_at WD Repeat Domain 17 WDR17 0.24
211113_s_at ATP-Binding Cassette, Sub-Family G (White), Member 1 ABCG1 0.28
207408_at Solute Carrier Family 22 (Organic Cation Transporter), Member 14 SLC22A14 0.30
233532_x_at Intraflagellar Transport 52 Homolog (Chlamydomonas) IFT52 0.34
214181_x_at Leukocyte-Specific Transcript 1 LST1 0.35
203404_at Armadillo Repeat Containing, X-Linked 2 ARMCX2 0.36
203765_at Grancalcin, Ef-Hand Calcium Binding Protein GCA 0.36
1555046_at FSH Primary Response (Lrpr1 Homolog, Rat) 1 CENPI 0.37
235991_at CUB Domain Containing Protein 2 CDCP2 0.37
1554112_a_at Unc-51-Like Kinase 2 (C. Elegans) ULK2 0.37
235349_at Family With Sequence Similarity 82, Member A FAM82A 0.38
206928_at Zinc Finger Protein 124 (Hzf-16) ZNF124 0.39
236943_at Lymphocyte Antigen 86 LY86 0.39
242996_at Mitochondrial Translational Release Factor 1 MTRF1 0.40