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Table 3 Genes down-regulated in the cytoplasm in the presence of HTLV-I p30

From: Genome wide analysis of human genes transcriptionally and post-transcriptionally regulated by the HTLV-I protein p30

Probe ID Gene Description Gene Fold Change
  Transcription/Translation/RNA Processing   
209060_X_AT Nuclear Receptor Coactivator 3 NCOA3 0.11
242113_AT A Kinase (Prka) Anchor Protein 8-Like AKAP8L 0.11
228711_AT Zinc Finger Protein 37a (Kox 21) ZNF37A 0.14
238185_AT RNA Binding Motif, Single Stranded Interacting Protein 1 RBMS1 0.20
223409_AT Forkhead Box K2 FOXK2 0.23
1557813_AT Single-Stranded DNA Binding Protein 2 SSBP2 0.29
213837_AT Lethal (3) Malignant Brain Tumor L(3)Mbt Protein (Drosophila) Homolog L3MBTL 0.31
240482_AT Histone Deacetylase 3 HDAC3 0.32
203674_AT Helicase With Zinc Finger HELZ 0.37
242407_AT Arginine-Glutamic Acid Dipeptide (Re) Repeats RERE 0.38
212720_AT Poly(A) Polymerase Alpha PAPOLA 0.38
1562741_AT Ubx Domain Containing 2 UBXD2 0.39
213756_S_AT Heat Shock Transcription Factor 1 HSF1 0.40
  Metabolism   
213935_AT Abhydrolase Domain Containing 5 ABHD5 0.04
237849_AT Mannosidase, Alpha, Class 1a, Member 1 MAN1A1 0.17
208917_X_AT NAD Kinase NADK 0.24
1570165_AT Carbohydrate (Chondroitin 4) Sulfotransferase 11 CHST11 0.33
238114_AT Protein-L-Isoaspartate (D-Aspartate) O-Methyltransferase Domain Containing 1 PCMTD1 0.34
236742_AT ADP-Ribosylation Factor Guanine Nucleotide-Exchange Factor 1(Brefeldin A-Inhibited) ARFGEF1 0.35
210963_S_AT Glycogenin 2 GYG2 0.36
223142_S_AT Uridine-Cytidine Kinase 1 UCK1 0.37
243501_AT ATP Synthase, H+ Transporting, Mitochondrial F0 Complex, Subunit B1 ATP5F1 0.37
207904_S_AT Leucyl/Cystinyl Aminopeptidase LNPEP 0.38
203180_AT Aldehyde Dehydrogenase 1 Family, Member A3 ALDH1A3 0.40
  Cell Signaling/Immune System   
234628_AT Rab28, Member Ras Oncogene Family RAB28 0.11
201295_S_AT WD Repeat And Socs Box-Containing 1 WSB1 0.18
235213_AT Inositol 1,4,5-Trisphosphate 3-Kinase B ITPKB 0.19
229895_S_AT Nck Adaptor Protein 1 NCK1 0.25
223674_S_AT CDC42 Small Effector 1 CDC42SE1 0.28
205988_AT CD84 Antigen (Leukocyte Antigen) CD84 0.28
242946_AT CD53 Antigen CD53 0.30
226375_AT Lemur Tyrosine Kinase 2 LMTK2 0.32
203854_AT Complement Factor I CFI 0.36
1569022_A_AT Phosphoinositide-3-Kinase, Class 2, Alpha Polypeptide PIK3C2A 0.37
204813_AT Mitogen-Activated Protein Kinase 10 MAPK10 0.38
235419_AT Erbb Receptor Feedback Inhibitor 1 ERRFI1 0.39
  Cell Division/DNA Replication & Repair   
229548_AT Unc-84 Homolog B (C. Elegans) UNC84B 0.07
1557830_AT Cyclin J CCNJ 0.28
  Cytoskeleton   
211089_S_AT Nima (Never In Mitosis Gene A)-Related Kinase 3 NEK3 0.13
243988_AT Tubulin Tyrosine Ligase-Like Family, Member 5 TTLL5 0.14
240363_AT Ankyrin 1, Erythrocytic ANK1 0.16
217297_S_AT Myosin IXb MYO9B 0.18
1565149_AT Dynein, Cytoplasmic 2, Heavy Chain 1 DYNC2H1 0.31
236437_AT Laminin, Beta 1 LAMB1 0.34
239170_AT Arp3 Actin-Related Protein 3 Homolog (Yeast) ACTR3 0.37
215910_S_AT Fibronectin Type III Domain Containing 3a FNDC3A 0.38
  Transport   
1553148_A_AT Sorting Nexin 13 SNX13 0.12
233420_AT Nucleoporin 133 kda NUP133 0.27
207594_S_AT Synaptojanin 1 SYNJ1 0.30
203106_S_AT Vacuolar Protein Sorting 41 (Yeast) VPS41 0.31
212921_AT Set And Mynd Domain Containing 2 SMYD2 0.35
1559862_AT Coatomer Protein Complex, Subunit Alpha COPA 0.37
244219_AT Wilms Tumor 1 Associated Protein WTAP 0.39
  Apoptosis   
1562111_AT Brain And Reproductive Organ-Expressed (Tnfrsf1a Modulator) BRE 0.01
241876_AT MDM4, Transformed 3T3 Cell Double Minute 4, p53 Binding Protein MDM4 0.27
  Other/Unknown   
227425_AT Ralbp1 Associated Eps Domain Containing 2 REPS2 0.06
244571_S_AT Tetratricopeptide Repeat Domain 12 TTC12 0.08
242870_AT Family With Sequence Similarity 80, Member B FAM80B 0.10
222566_AT Suppressor Of Variegation 4–20 Homolog 1 (Drosophila) SUV420H1 0.10
240149_AT Amplified In Breast Cancer 1 HEATR6 0.11
232304_AT Pellino Homolog 1 (Drosophila) PELI1 0.13
238995_AT Sulfotransferase Family, Cytosolic, 1a, Phenol-Preferring, Member 1 SULT1A1 0.18
231437_AT Solute Carrier Family 35, Member D2 SLC35D2 0.19
242662_AT Proprotein Convertase Subtilisin/Kexin Type 6 PCSK6 0.20
1557394_AT Discs, Large (Drosophila) Homolog-Associated Protein 4 DLGAP4 0.20
238011_AT Pro0149 Protein C16ORF72 0.20
241268_X_AT SAM Domain And HD Domain 1 SAMHD1 0.21
222038_S_AT WD Repeat Domain 50 UTP18 0.22
231003_AT Solute Carrier Family 35, Member B3 SLC35B3 0.22
242268_AT Cug Triplet Repeat, RNA Binding Protein 2 CUGBP2 0.26
202516_S_AT Discs, Large Homolog 1 (Drosophila) DLG1 0.26
1556839_S_AT Spectrin, Beta, Non-Erythrocytic 5 SPTBN5 0.27
221430_S_AT Ring Finger Protein 146 RNF146 0.28
1558941_AT Zinc Finger Protein 704 ZNF704 0.29
211392_S_AT Zinc Finger Protein 278 PATZ1 0.29
216604_S_AT Solute Carrier Family 7 (Cationic Amino Acid Transporter, Y+ System), Member 8 SLC7A8 0.29
240125_AT Dystrobrevin, Alpha DTNA 0.30
207781_S_AT Zinc Finger Protein 6 (Cmpx1) ZNF711 0.30
1559078_AT B-Cell Cll/Lymphoma 11a (Zinc Finger Protein) BCL11A 0.31
237747_AT Family With Sequence Similarity 107, Member B FAM107B 0.32
1570165_AT Carbohydrate (Chondroitin 4) Sulfotransferase 11 CHST11 0.33
219846_AT Gon-4-Like (C.Elegans) GON4L 0.36
209766_AT Peroxiredoxin 3 PRDX3 0.37
1556538_AT Antigen P97 (Melanoma Associated) Identified By Monoclonal Antibodies 133.2 And 96.5 MFI2 0.37
243367_AT Dopamine Receptor D5 Pseudogene 2 DRD5P2 0.37
1552678_A_AT Ubiquitin Specific Peptidase 28 USP28 0.38
236603_AT WD Repeat Domain 32 WDR32 0.38
224703_AT WD Repeat Domain 22 WDR22 0.39
232362_AT Coiled-Coil Domain Containing 18 CCDC18 0.40
213748_AT Tripartite Motif-Containing 66 TRIM66 0.40