Skip to main content

Table 1 Discrepancies between oligo-capped cDNAs and annotated gene models

From: Inconsistencies of genome annotations in apicomplexan parasites revealed by 5'-end-one-pass and full-length sequences of oligo-capped cDNAs

Species Nucleotide level (%) Exon level Discrepant No./Total No. (%) Gene level Discrepant No./Total No. (%)
Pf 2.6% 175/2,075 (8%) 133/1,543 (9%)
Pv 3.9% 320/2,371 (13%) 258/1,457 (18%)
Py 7.5% 302/1,939 (16%) 233/1,340 (17%)
Pb 3.0% 94/377 (25%) 53/254 (21%)
Cp 1.1% 33/669 (5%) 32/658 (5%)
Tg 7.0% 245/1,556 (16%) 191/780 (24%)
Average 4.2% 14% 16%
  1. For further detailed information see the text.