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Table 2 HTR mapped probesets and tags called present.

From: Identification of differentially expressed sense and antisense transcript pairs in breast epithelial tissues

 

Total number of probesets mapped to HTR

Total mapped probesets present in sense normal breast epithelium

Total mapped probesets present in antisense normal breast epithelium

Total mapped probesets present in sense malignant breast epithelium

Total mapped probesets present in antisense malignant breast epithelium

DSA

41,781

(100%)

12,330

(29%)

2,407

(5.8%)

13,408

(33.3%)

2,728

(6.5%)

Plus 2.0

41,523

(100%)

9,655

(23.2%)

433

(1%)

10,447

(25.2%)

131

(0.3%)

MPSS

13,826

(100%)

5,614

(40%)

94

(0.7%)

7,329

(53%)

155

(1.1%)

  1. Total number of probesets/tags mapped to the HTR database and the number of present calls seen in normal and malignant breast epithelium in both sense and antisense orientations. These numbers indicate the actual detections levels of each technology.