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Table 1 N2 and DR1350 inter-line differences in gene expression.

From: Natural variation in gene expression in the early development of dauer larvae of Caenorhabditis elegans

Gene list Query/List p value
Up in DR1350 compared with N2
Mount 14 147/352 < 1.880e-105
Histones 32/73 < 6.591e-23
Mount 1 161/1698 < 2.754e-20
Mount 36 9/10 < 4.845e-11
Mount 32 13/24 < 1.222e-10
Heat shock 14/33 < 1.533e-09
Cell adhesion 13/45 < 2.281e-06
Mount 16 29/223 < 1.009e-05
Cell structure 28/218 < 2.133e-05
Collagen 24/179 < 6.758e-05
Amino acid metabolism 16/104 < 7.338e-04
MSP 10/43 < 7.646e-04
Carbohydrate metabolism 16/120 < 0.005
Up in N2 compared with DR1350
Mount 6 168/892 < 2.303e-35
Mount 2 186/1418 < 3.745e-19
Mount 8 122/803 < 7.331e-17
Mount 5 124/915 < 3.251e-13
Biosynthesis 78/475 < 2.733e-12
RNA pol II transcription 61/370 < 1.483e-09
Mount 1 180/1698 < 2.261e-09
Mount 20 36/159 < 2.543e-09
Germ line-enriched 73/507 < 1.089e-08
Mount 11 79/576 < 2.035e-08
Protein expression 59/380 < 3.368e-08
Mount 15 43/247 < 2.352e-07
Mitochondrial 32/164 < 1.432e-06
RNA binding 35/209 < 1.736e-05
Dauer 10/22 < 1.952e-05
Mount 24 23/133 < 0.001
tRNA synthetase 9/30 < 0.005
Mount 31 8/25 < 0.007
  1. The gene lists that are significantly over represented among genes whose expression is significantly different between N2 and DR1350. Query/List shows the number of genes whose expression is significantly different between N2 and DR1350/the total number of genes within the gene list. p value is the probability that the occurrence of the number of query genes in the gene list is random, with this Holm-Bonferroni corrected for multiple testing. MSP – major sperm protein. Expression mounts are as defined by [40].