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Table 1 N2 and DR1350 inter-line differences in gene expression.

From: Natural variation in gene expression in the early development of dauer larvae of Caenorhabditis elegans

Gene list

Query/List

p value

Up in DR1350 compared with N2

Mount 14

147/352

< 1.880e-105

Histones

32/73

< 6.591e-23

Mount 1

161/1698

< 2.754e-20

Mount 36

9/10

< 4.845e-11

Mount 32

13/24

< 1.222e-10

Heat shock

14/33

< 1.533e-09

Cell adhesion

13/45

< 2.281e-06

Mount 16

29/223

< 1.009e-05

Cell structure

28/218

< 2.133e-05

Collagen

24/179

< 6.758e-05

Amino acid metabolism

16/104

< 7.338e-04

MSP

10/43

< 7.646e-04

Carbohydrate metabolism

16/120

< 0.005

Up in N2 compared with DR1350

Mount 6

168/892

< 2.303e-35

Mount 2

186/1418

< 3.745e-19

Mount 8

122/803

< 7.331e-17

Mount 5

124/915

< 3.251e-13

Biosynthesis

78/475

< 2.733e-12

RNA pol II transcription

61/370

< 1.483e-09

Mount 1

180/1698

< 2.261e-09

Mount 20

36/159

< 2.543e-09

Germ line-enriched

73/507

< 1.089e-08

Mount 11

79/576

< 2.035e-08

Protein expression

59/380

< 3.368e-08

Mount 15

43/247

< 2.352e-07

Mitochondrial

32/164

< 1.432e-06

RNA binding

35/209

< 1.736e-05

Dauer

10/22

< 1.952e-05

Mount 24

23/133

< 0.001

tRNA synthetase

9/30

< 0.005

Mount 31

8/25

< 0.007

  1. The gene lists that are significantly over represented among genes whose expression is significantly different between N2 and DR1350. Query/List shows the number of genes whose expression is significantly different between N2 and DR1350/the total number of genes within the gene list. p value is the probability that the occurrence of the number of query genes in the gene list is random, with this Holm-Bonferroni corrected for multiple testing. MSP – major sperm protein. Expression mounts are as defined by [40].