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Table 2 Putative TSDs flanking TvMULEs and the unknown repeat

From: The protist Trichomonas vaginalis harbors multiple lineages of transcriptionally active Mutator-like elements

Family TSD
  Length (bp) Sequence
TvMULE2 10 ATATATCGGC
   TTTATCGCTGa
  11 AATTGATGAAA
   CCTTAATTCAA
   CCATTTTGATA
   TAATTCTCCAT
   TTTCCCTGAAA
   TGGTTTTATGA
   GAAACAATTAA
  12 TTAAATTACTTC
  14 AATTAAAAAAATAT
TvMULE3 11 CTATTTAAAAG
   TTTTTTGATAA
   TTTAAGGTGTT
TvMULE4 12 AAAAAATTTTGA
   AATTTTTTCGAA
   ATATATCTTTAA
   ATTTTTGAAAAA
   TATACATATATA
   TTATTATTTTAA
   TTTCTTTTTTAT
  13 AAAAATTTTGAAA
   ATTTTTTCTGGAT
   AGATTTTTGAAAA
   CTTATTTTTTGAA
   TTTCAAAATTTTT
Unknown 8 TAGATTTTb
  9 ATCAAAAAGc
  1. aDuplication upon the chosen canonical copy;
  2. Duplication upon the insertion contained in the: bcontig 85938 and ccontig91860.
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