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Table 3 Summary of 12 genes whose 5' ends of mRNA were analyzed by primer extension assays.

From: Genome-wide analysis of the RpoN regulon in Geobacter sulfurreducens

Gene # ID Promoter elements validated In agreement with microarray data In agreement with PromScan
Up-regulated according to microarray analysis
GSU0364 ppcB RpoD Yes Yes
GSU1836 glnB RpoN No Yes
GSU2005 ABC transporter RpoD Yes No
GSU2302 Trehalose phosphatase RpoD Yes Yes
GSU2490 Oxalate-formate antiporter RpoD Yes No
GSU2751 dcuB RpoN Yes Yes
GSU3206 dksA RpoD Yes No
Down-regulated according to microarray analysis
GSU0420 fliL RpoN Yes Yes
GSU0777 fdnG RpoN Yes Yes
GSU0939 PII RpoD Yes No
GSU2806 nifEN RpoN Yes Yes
GSU3046 flgJ RpoN Yes Yes