Skip to main content

Table 1 The silkworm OBP genes family

From: The Odorant Binding Protein Gene Family from the Genome of Silkworm, Bombyx mori

New name Previous name Scaffold ID Chromosome Annotation Probe Expression
BmorOBP1 BmorGOBP1 nscaf3052 19 BGIBMGA012611 sw04017 An1
BmorOBP2 BmorGOBP2 nscaf3052 19 BGIBMGA012614 sw15189 An1
BmorOBP3 BmorPBP1 nscaf3052 19 BGIBMGA012615 sw09490 An6
BmorOBP4   nscaf3052 19 BGIBMGA012616* sw09491  
BmorOBP5   nscaf3052 19    
BmorOBP6   nscaf3052 19 BGIBMGA012617 sw01959  
BmorOBP7   nscaf2902 18 BGIBMGA008356* sw11831†  
BmorOBP8   nscaf2902 18 BGIBMGA008355* sw11831† Mg2
BmorOBP9       Mg2, Ep7
BmorOBP10   nscaf2902 18    
BmorOBP11   nscaf2902 18 BGIBMGA008354 sw22119 Mg100
BmorOBP12   nscaf2902 18    Mg12
BmorOBP13   nscaf2902 18 BGIBMGA008353* sw15408 Mg3
BmorOBP14   nscaf2902 18   sw15407 An1
BmorOBP15   nscaf2902 18 BGIBMGA008352* sw21849  
BmorOBP16   nscaf2902 18    
BmorOBP17   nscaf2902 18 BGIBMGA008351   
BmorOBP18   nscaf2902 18 BGIBMGA008474   
BmorOBP19   nscaf2902 18   sw13149†  
BmorOBP20 BmorABPX nscaf2330 26 BGIBMGA002308 sw00604  
BmorOBP21   nscaf2674 5 BGIBMGA003463*  
BmorOBP22   nscaf2529 5 BGIBMGA002630   Em1
BmorOBP23   nscaf2529 5 BGIBMGA002629 sw03370 Mg37, Sm2, Wd1
BmorOBP24   nscaf2529 5 BGIBMGA002628 sw12016  
BmorOBP25   nscaf2529 5 BGIBMGA002627 sw20121†  
BmorOBP26   nscaf2529 5 BGIBMGA002666* sw20121† Mg1
BmorOBP27   nscaf2529 5 BGIBMGA002626 sw20121† Sp3, Sm3, An3, Mt1, Fs1, Bp1, Mi2, Wd10, Te1
BmorOBP28   scaffold896     
BmorOBP29   nscaf2983 7 BGIBMGA010039* sw15978 Te2, Fp1
BmorOBP30   nscaf2983 7 BGIBMGA010011* sw04366† Bp1
BmorOBP31   nscaf2983 7 BGIBMGA010010 sw15426 Ce2, Bs8, Bp24
BmorOBP32   nscaf2943 14 BGIBMGA009290* sw00262 Pb1, He1
BmorOBP33   nscaf2943 14 BGIBMGA009291   
BmorOBP34   nscaf2943 14 BGIBMGA009292*  
BmorOBP35   nscaf2943 14    
BmorOBP36   nscaf2948 14 BGIBMGA009352* sw14581  
BmorOBP37   nscaf2948 14 BGIBMGA009366* sw05807  
BmorOBP38   nscaf3063 16 BGIBMGA013247 sw14065 Mg4
BmorOBP39   nscaf1681 22 BGIBMGA000225* sw00870 EP1
BmorOBP40   nscaf3026 23 BGIBMGA011298* sw11835 Fl2
BmorOBP41   nscaf3026 23 BGIBMGA011276* sw11149 Ov5, Ep1
BmorOBP42   nscaf3027 23 BGIBMGA011433 sw20434 Mg2
BmorOBP43   nscaf3027 23 BGIBMGA011432* sw03198 Ov6, Fs3, fl3, fp2
BmorOBP44   nscaf2993 12 BGIBMGA010425 sw09301 Fp3
  1. This table lists the nomenclature, accession numbers, ID, Chromosome, array probe and expression of all 42 odorant binding-like protein genes identified in this study. We have modified annotations to some of the BmOBP genes as indicated by the asterisk. four probes with approximately 20 bases mismatched to the gene sequences are marked with a cross mark. The tissue type of EST data was indicated using abbreviations: Mg (maxillary galea), Sm (middle silkgland), Sp (posterior silkgland), Wd (wing disk), Mt (Malpighian tubule), Fl (Fat body), Mi (Midgut), Te (Testis), He (Hemocyte), Ep (Epidermis) (5th instar larva day 3), Fp (Fat body, pupa 0), Fs (Fat body, spinning 2), Ov (Ovary, spinning stage day-0, day-3), Ce (compound eye, mixed stages from 5th instar larva to pupa), Bs (Brain, mixed stages from day three 5th instar to S3), Bp (Brain, a mixture of pupal stages after P1, just after pupation), An (antenna, adult moth), Em (Embryo, 72 hours), Pb (whole mid-stage pupae without the cuticle). The number of EST is appended to the tissue type.
Back to article page

BMC Genomics

ISSN: 1471-2164

Contact us