Skip to main content

Table 1 The 19 most abundant transcripts (>100 ESTs)

From: Comprehensive EST analysis of the symbiotic sea anemone, Anemonia viridis

     

Top hit Swissprot (2008.03)

Cluster ID

Total ESTs

Length (bp)

Description

N. vectensis top hit

(Uniprot ID)

Accession

Name

Organism

E-value

CL1Contig11

828

478

CCAAT/enhancer-binding protein beta

A7S4U3_NEMVE

O02755

CEBPB_BOVIN

Bos taurus

5E-17

CL1Contig8

482

1892

Elongation factor 1-alpha

A7SSW8_NEMVE

P19039

EF1A_APIME

Apis mellifera

0

CL2Contig7

340

1411

Actin, cytoplasmic

A7SCN8_NEMVE

Q964E3

ACTC_BIOAL

Biomphalaria alexandrina

0

CL3Contig4

334

764

Soma ferritin

A7S8I6_NEMVE

P42577

FRIS_LYMST

Lymnaea stagnalis

4E-68

CL1Contig4

322

968

lipoprotein PA4545 precursor

No hits found

P33641

Y9F5_PSEAE

Pseudomonas fluorescens

2E-31

CL4Contig4

311

3887

60S ribosomal protein L8

A7S5T9_NEMVE

Q9U9L2

RL8_ANOGA

Anopheles gambiae

2E-35

CL5Contig1

234

855

No hits found

No hits found

    

CL11Contig1

175

2915

Translation elongation factor 2

A7RSB9_NEMVE

Q1HPK6

EF2_BOMMO

Bombyx mori

0

CL3Contig3

172

1418

Pancreatic secretory granule membrane major glycoprotein GP2

A7S5P2_NEMVE

P25291

GP2_CANFA

Canis lupus familiaris

2E-18

CL12Contig1

170

2227

Polyadenylate-binding protein 4

A7SSV8_NEMVE

Q13310

PABP4_HUMAN

Homo sapiens

0

CL13Contig1

152

887

40S ribosomal protein S2

A7RJJ7_NEMVE

P49154

RS2_URECA

Urechis caupo

1E-114

CL2Contig1

148

1487

Actin, cytoskeletal 1A

A7RU31_NEMVE

P53472

ACTA_STRPU

Strongylocentrotus purpuratus

0

CL7Contig2

145

1224

ADP, ATP carrier protein, mitochondrial precursor

A7RN38_NEMVE

P31691

ADT_ORYSJ

Oryza sativa

1E-104

CL1Contig3

138

528

No hits found

No hits found

    

CL14Contig1

134

1084

60S acidic ribosomal protein P0

A7SQ36_NEMVE

P47826

RLA0_CHICK

Gallus gallus

1E-108

CL18Contig1

108

1100

40S ribosomal protein SA

A7RKS5_NEMVE

P50890

RSSA_CHICK

Gallus gallus

3E-94

CL20Contig1

106

2872

40S ribosomal protein S3a

A7S3J7_NEMVE

P49242

RS3A_RAT

Rattus norvegicus

1E-100

CL19Contig1

105

847

Heat shock 70 kDa protein cognate 4

A7SG65_NEMVE

Q9U639

HSP7D_MANSE

Manduca sexta

0

CL6Contig3

102

866

40S ribosomal protein S4

A7SRV8_NEMVE

P47961

RS4_CRIGR

Cricetulus griseus

1E-112