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Table 1 The 19 most abundant transcripts (>100 ESTs)

From: Comprehensive EST analysis of the symbiotic sea anemone, Anemonia viridis

      Top hit Swissprot (2008.03)
Cluster ID Total ESTs Length (bp) Description N. vectensis top hit
(Uniprot ID)
Accession Name Organism E-value
CL1Contig11 828 478 CCAAT/enhancer-binding protein beta A7S4U3_NEMVE O02755 CEBPB_BOVIN Bos taurus 5E-17
CL1Contig8 482 1892 Elongation factor 1-alpha A7SSW8_NEMVE P19039 EF1A_APIME Apis mellifera 0
CL2Contig7 340 1411 Actin, cytoplasmic A7SCN8_NEMVE Q964E3 ACTC_BIOAL Biomphalaria alexandrina 0
CL3Contig4 334 764 Soma ferritin A7S8I6_NEMVE P42577 FRIS_LYMST Lymnaea stagnalis 4E-68
CL1Contig4 322 968 lipoprotein PA4545 precursor No hits found P33641 Y9F5_PSEAE Pseudomonas fluorescens 2E-31
CL4Contig4 311 3887 60S ribosomal protein L8 A7S5T9_NEMVE Q9U9L2 RL8_ANOGA Anopheles gambiae 2E-35
CL5Contig1 234 855 No hits found No hits found     
CL11Contig1 175 2915 Translation elongation factor 2 A7RSB9_NEMVE Q1HPK6 EF2_BOMMO Bombyx mori 0
CL3Contig3 172 1418 Pancreatic secretory granule membrane major glycoprotein GP2 A7S5P2_NEMVE P25291 GP2_CANFA Canis lupus familiaris 2E-18
CL12Contig1 170 2227 Polyadenylate-binding protein 4 A7SSV8_NEMVE Q13310 PABP4_HUMAN Homo sapiens 0
CL13Contig1 152 887 40S ribosomal protein S2 A7RJJ7_NEMVE P49154 RS2_URECA Urechis caupo 1E-114
CL2Contig1 148 1487 Actin, cytoskeletal 1A A7RU31_NEMVE P53472 ACTA_STRPU Strongylocentrotus purpuratus 0
CL7Contig2 145 1224 ADP, ATP carrier protein, mitochondrial precursor A7RN38_NEMVE P31691 ADT_ORYSJ Oryza sativa 1E-104
CL1Contig3 138 528 No hits found No hits found     
CL14Contig1 134 1084 60S acidic ribosomal protein P0 A7SQ36_NEMVE P47826 RLA0_CHICK Gallus gallus 1E-108
CL18Contig1 108 1100 40S ribosomal protein SA A7RKS5_NEMVE P50890 RSSA_CHICK Gallus gallus 3E-94
CL20Contig1 106 2872 40S ribosomal protein S3a A7S3J7_NEMVE P49242 RS3A_RAT Rattus norvegicus 1E-100
CL19Contig1 105 847 Heat shock 70 kDa protein cognate 4 A7SG65_NEMVE Q9U639 HSP7D_MANSE Manduca sexta 0
CL6Contig3 102 866 40S ribosomal protein S4 A7SRV8_NEMVE P47961 RS4_CRIGR Cricetulus griseus 1E-112