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Table 1 A summary of the assembled transcripts

From: Characterization of the Zoarces viviparus liver transcriptome using massively parallel pyrosequencing

  Contigs Singlets Total
Number of sequences 36,110 17,347 53,457
Number of bases 14,250,156 4,050,061 18,300,217
Average length (bases) 395 233 342
Max length (bases) 3,401 608 3,401
GC-content 46.8% 43.5% 46.1%
Average coverage 3.46 1 2.67
Found in Uniprota 73.4% 69.8% 72.2%
Found in at least one of the five available fish genomesa, b 89.2% 87.3% 88.6%
  1. a Using a BLAST E-value cut-off of 10-5
  2. b Gasterosteus aculeatus, Tetraodon nigroviridis, Takifugu rubripes, Oryzias latipes and Danio rerio.