From: Global effect of RpoS on gene expression in pathogenic Escherichia coli O157:H7 strain EDL933
Gene | MER | Function | Major regulator |
---|---|---|---|
ampG | -13 | Muropeptide Major facilitator superfamily (MFS) transporter | Â |
ansP | -12 | L-asparagine permease | Â |
ccmBC* | -8/-24 | Protoheme IX ABC transporter | Â |
cmr | -9 | MFS multidrug transporter | Â |
codBA | -26/-5 | Cytosine transporter/deaminase | Nac PurR |
dusC | -13 | tRNA dihydrouridine synthase | Â |
emrAB | -4/-11 | EmrAB-TolC multidrug efflux | MprA |
endA | -9 | DNA-specific endonuclease I | Â |
guaBA | -16/-6 | Purine nucleotides de novo biosynthesis I | Fis CRP PurR DnaA |
lpxT | -14 | Und-PP pyrophosphatase | Â |
mscK | -9 | Mechanosensitive (MS) channel | Â |
napFD | -13/-4 | Ferredoxin-type protein/chaperone for NapA | NarL NarP FNR FlhDC ModE |
ndh | -12 | NADH dehydrogenase II | Fis FNR ArcA PdhR IHF |
pdhR | -10 | Pyruvate dehydrogenase regulator | CRP FNR PdhR |
proVWX | -10/-6/-2 | Proline ABC transporter | H-NS |
purEK | -22/-18 | Purine nucleotides de novo biosynthesis I | PurR |
purT | -27 | Purine nucleotides de novo biosynthesis I | Â |
pyrD | -21 | Dihydroorotate oxidase | PurR Fis |
pyrL | -39 | Pyr operon leader peptide | Â |
rarD | -9 | Putative permease | Â |
rhlE | -18 | ATP-dependent RNA helicase | Â |
rsxABCDGE-nth | -10/-4/-7/-13/-26/-7/-16 | SoxR reducing system/endonuclease III | Â |
speC | -10 | Putrescine biosynthesis III | CRP |
thiI | -12 | Thiamine biosynthesis | Â |
tyrP | -15 | Tyrosine transporter | TyrR |
uhpABC | -5/-9/-18 | Uptake of hexose phosphates | Â |
uraA | -13 | Uracil transport | Â |
xseA | -10 | Exonuclease VII | CRP |
yaaH | -11 | Inner membrane protein | Â |
yccFS | -36/-27 | Inner membrane protein | Â |
ychM | -27 | Unknown function | Â |
ydeA | -35 | MFS transporter | Â |
ydeP | -12 | Acid resistance protein | EvgA |
yegD | -14 | Actin family protein | Â |
ygiR | -12 | Unknown function | Â |
yhfC | -40 | MFS transporter | ArcA |
yhhQ | -15 | Unknown function | Â |
yhjV | -14 | Putative transporter protein | Â |
yieG | -17 | Putative transporter protein | Â |
yliG | -14 | Unknown function | Â |
ynjE | -22 | Putative sulfur transferase | Â |
yoaG | -28 | Unknown function | Â |
yobD | -28 | Unknown function | Â |
Z2059 | -11 | Prophage CP-933O protein | Â |
Z2274 | -20 | Unknown function | Â |
Z2389 | -9 | Prophage CP-933R protein | Â |
Z2605 | -20 | Putative arginine/ornithine antiporter | Â |
Z2751 | -15 | Unknown function | Â |
Z3622 | -9 | Putative resolvase | Â |
Z4223 | -13 | Unknown function | Â |