Table 2 Aromatic degradation in D. aromatica: Mono- and Di-oxygenases.
VIMSS id | Orthologs | Putative function | Size aas |
|---|---|---|---|
581514 | TbuA1/TmoA/TouA/PhlK/Tbc2A | methane/phenol/toluene hydroxylase | 501 |
581515 | TbuU/TmoE/TouB/PhlL/Tbc2B | toluene-4-monooxygenase | 88 |
581516 | TbuB/TmoC/TouC/PhlM/Tbc2C | ferredoxin subunit of ring-hydroxylating dioxygenase | 111 |
581517 | TbuV/TmoD/TouD/PhlN/Tbc2C | monooxygenase | 146 |
581518 | TbuA2/TmoB/TouE/PhlO/Tbc2E | hydroxylase | 328 |
581519 | TbuC/TmoF/TouF/PhlP/Tbc2F | flavodoxin reductase | 338 |
581520 | TbuX/TodX/XylN | membrane protein; transport | 464 |
581521 | histidine kinase | signal transduction | 963 |
581522 | NarL | cheY like protein | 208 |
581523 | methyl-accepting chemotaxis protein | chemotaxis sensory transducer, membrane bound | 532 |
581524 | 4-oxalocrotonate tautomerase | tautomerase | 144 |
581525 | oxidoreductase | oxidoreductase/dehydrogenase | 254 |
581526 | MhpE | 4-hydroxy-2-oxovalerate aldolase | 354 |
581527 | MhpF | EC1.2.1.10 Acetaldehyde dehydrogenase (acetylating) | 305 |
581528 | 2-hydroxymuconic semialdehyde dehydrogenase | NAD+-dependent dehydrogenase (EC1.2.1.60) | 489 |
581529 | ring-cleaving extradiol dioxygenase | catechol 2,3 dioxygenase (1.13.11.2) | 311 |
581530 | aldolase | 4-hydroxyphenylacetic acid catabolism pathway | 266 |
581531 | S box domain | signal transduction | 143 |
584293 | orf | unknown | 63 |
581532 | orf | unknown | 80 |
584294 | EAL domain containing protein (obsolete in current VIMSS database) | diguanylate phosphodiesterase; signaling | 65 |
581533 | transcriptional regulator | LysR-type | 300 |
581534 | response regulator, tbuT family | activator of aromatic catabolism | 558 |
812947 | PhcK/DmpK/PhhK/PheA1/Tcb1A/AphK | monooxygenase | 89 |
581535 | PhcL/DmpL/PhhL/PheA2/Tcb1B/AphL | hydroxylase | 329 |
581536 | PhcM/DmpM/PhhM/PheA3/Tcb1C/AphM | monooxygenase | 89 |
581537 | PhcN/DmpN/PhhN/PheA4/Tcb1D | aromatic hydroxylase | 517 |
581538 | PhcO/DmpO/PhhO/PheA5/Tcb1E/AphO | aromatic hydroxylase | 118 |
581539 | PhcP/Dmp/PhhP/PheA6/Tcb1F/AphQ | hydroxylase reductase | 353 |
581540 | ferredoxin | 2Fe-2S ferredoxin, iron-sulfur binding site | 112 |
581541 | transcriptional regulator | IPR000524: Bacterial regulatory protein GntR, HTH | 235 |
581542 | ring-cleaving extradiol dioxygenase | catechol 2,3 dioxygenase (EC1.13.11.2) | 308 |
581543 | orf | unknown | 142 |
581544 | 2-hydroxymuconic semialdehyde dehydrogenase | NAD+-dependent dehydrogenase (EC1.2.1.60) | 484 |
581545 | MhpC | 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase | 274 |
581546/3337834 | MhpD | 2-keto-4-pentenoate hydratase | 260 |
581547 | oxidoreductase | 3-oxoacyl-[acyl-carrier-protein] reductase (EC1.1.1.100) | 264 |
581548 | MhpF | acetaldehyde dehydrogenase (acetylating; EC1.2.1.10) | 304 |
581549 | MhpE | 4-hydroxy-2-oxovalerate aldolase | 343 |
581550 | hydratase/decarboxylase | 4-oxalocrotonate decarboxylase | 262 |
581551 | tautomerase | 4-oxalocrotonate tautomerase | 63 |