Table 4 Putative nitrogen fixation gene cluster in D. aromatica
VIMSS id | Ortholog | Size, aas |
|---|---|---|
583652 | FldA, flavodoxin typical for nitrogen fixation | 186 |
583653 | hypothetical protein | 86 |
583654 | NafY-1, nitrogenase accessory factor Y | 247 |
583655 | NifB, nitrogenase cofactor biosynthesis protein | 500 |
583656 | 4Fe-4S ferredoxin | 92 |
583657 | nitrogenase-associated protein | 159 |
583658 | flavodoxin | 423 |
583659 | ferredoxin, nitric oxide synthase | 95 |
583660 | 2Fe-2S ferredoxin | 120 |
583661 | NifQ | 190 |
583662 | DraG | 326 |
583663 | histidine kinase | 1131 |
583664 | Che-Y like receiver | 308 |
583666 | UrtA urea transport | 420 |
583667/3337562 | CynS cyanate lyase | 147 |
583668 | S-box sensor, similar to oxygen sensor arcB | 794 |
583669 | ABC transporter | 393 |
3337561 | Protein of unknown function involved in nitrogen fixation | 72 |
583671 | UrtB urea transport | 525 |
583672 | UrtC urea transport | 371 |
583673 | UrtD urea transport | 278 |
583674 | UrtE urea transport | 230 |
583677 | UreH urease accessory protein | 288 |
583678 | Urea amidohydrolase gamma | 100 |
583679 | Urea amidohydrolase beta | 101 |
583680 | Urea amidohydrolase alpha/UreC urease accessory protein | 569 |
583681 | UreE urease accessory protein | 175 |
583682 | UreF urease accessory protein | 228 |
583683 | UreG urease accessory protein | 201 |
583685 | nitroreductase | 558 |
583686 | ferredoxin, subunit of nitrite reductase | 122 |
583691 | DraT | 328 |
583692 | NifH nitrogenase iron protein (EC1.18.6.1) | 296 |
583693 | NifD nitrogenase molybdenum-iron protein alpha chain (EC1.18.6.1) | 490 |
583694 | NifK nitrogenase molybdenum-iron protein beta chain (EC1.18.6.1) | 522 |
583695/3337559 | NifT | 80 |
3337558 | ferredoxin | 63 |
583696 | NafY-2 nitrogenase accessory factor Y | 243 |
583710/3337556 | NifW nitrogen fixation protein | 113 |
3337555 | NifZ | 151 |
583711/3337554 | NifM | 271 |