From: Genome-wide computational identification of functional RNA elements in Trypanosoma brucei
Classification | Within 100 bp of a non-overlapping coding sequence** | Within/flanking ncRNA cluster (no. of ncRNAs >2)*** | Within a strand switch region*** | Elsewhere | Total |
---|---|---|---|---|---|
Overlap CDS | 0 | 0 | 0 | 36 | 36 |
Overlap pseudogene | 0 | 0 | 0 | 1 | 1 |
Overlap unlikely proteins | 0 | 0 | 0 | 0 | 0 |
Homologous to rRNA*,** | 0 | 4 | 2 | 1 | 5 |
Homologous to tRNA* | 1 | 0 | 0 | 0 | 1 |
Overlap known ncRNA** | 0 | 25 | 7 | 1 | 26 |
Overlap Ingi/RIME repeat | 0 | 0 | 0 | 0 | 0 |
Unclassified | 8 | 1 | 1 | 43 | 53 |
Total | 9 | 26 | 8 | 81 | 117 |