|  |  | # of clusters with TE hit | |||
---|---|---|---|---|---|---|
Transposable Element | Type | Class | Total | L | P1 | P2 |
297 | Retroviral | I | 1 | 1 | 0 | 0 |
412 | Retroviral | I | 2 | 2 | 0 | 0 |
1731 | Retroviral | I | 2 | 2 | 0 | 0 |
3S18 | Retroviral | I | 2 | 2 | 0 | 0 |
baggins | non-LTR retrotransposon | I | 7 | 4 | 1 | 2 |
blood | Retroviral | I | 2 | 2 | 0 | 0 |
Burdock | Retroviral | I | 1 | 1 | 0 | 0 |
Cr1a | non-LTR retrotransposon | I | 1 | 1 | 0 | 0 |
Dana\Tom | Retroviral | I | 1 | 1 | 0 | 0 |
Dbuz\Osvaldo | Retroviral | I | 1 | 1 | 0 | 0 |
diver | Retroviral | I | 2 | 2 | 0 | 0 |
diver2 | Retroviral | I | 4 | 4 | 0 | 0 |
Dm88 | Retroviral | I | 4 | 4 | 1 | 0 |
Dmer\R1A3 | non-LTR retrotransposon | I | 2 | 2 | 0 | 0 |
Dmir\TRAM | Retroviral | I | 1 | 1 | 0 | 0 |
Dmir\TRIM | Retroviral | I | 3 | 2 | 1 | 0 |
Doc | non-LTR retrotransposon | I | 7 | 6 | 1 | 0 |
Doc2-element | non-LTR retrotransposon | I | 3 | 3 | 0 | 0 |
Doc3-element | non-LTR retrotransposon | I | 3 | 2 | 1 | 0 |
Doc4-element | non-LTR retrotransposon | I | 1 | 1 | 0 | 0 |
Dsil\Loa | non-LTR retrotransposon | I | 4 | 4 | 0 | 0 |
Dsub\bilbo | non-LTR retrotransposon | I | 11 | 10 | 1 | 0 |
Dvir\Helena | non-LTR retrotransposon | I | 1 | 1 | 0 | 0 |
Dvir\Paris | IR-elements | I | 2 | 1 | 1 | 0 |
Dvir\Penelope | non-LTR retrotransposon | I | 5 | 4 | 0 | 1 |
Dvir\Tel | Retroviral | I | 1 | 1 | 0 | 0 |
F-element | non-LTR retrotransposon | I | 8 | 8 | 0 | 0 |
flea | Retroviral | I | 5 | 5 | 0 | 0 |
Fw2 | non-LTR retrotransposon | I | 1 | 0 | 1 | 0 |
G-element | non-LTR retrotransposon | I | 1 | 1 | 0 | 0 |
G2 | non-LTR retrotransposon | I | 1 | 1 | 0 | 0 |
G3 | non-LTR retrotransposon | I | 6 | 5 | 0 | 1 |
G4 | non-LTR retrotransposon | I | 10 | 9 | 0 | 1 |
gtwin | Retroviral | I | 2 | 2 | 0 | 0 |
gypsy4 | Retroviral | I | 1 | 1 | 0 | 0 |
gypsy8 | Retroviral | I | 1 | 1 | 0 | 0 |
gypsy9 | Retroviral | I | 1 | 1 | 0 | 0 |
Helena | non-LTR retrotransposon | I | 1 | 1 | 0 | 0 |
Helitron | Helitron | I | 2 | 2 | 1 | 0 |
HMS-Beagle | Retroviral | I | 3 | 3 | 0 | 0 |
invader3 | Retroviral | I | 2 | 2 | 0 | 0 |
invader6 | Retroviral | I | 1 | 1 | 0 | 0 |
Ivk | non-LTR retrotransposon | I | 1 | 0 | 0 | 1 |
jockey | non-LTR retrotransposon | I | 1 | 1 | 0 | 0 |
Max-element | Retroviral | I | 4 | 3 | 1 | 0 |
McClintock | Retroviral | I | 1 | 1 | 0 | 0 |
mdg1 | Retroviral | I | 1 | 1 | 0 | 0 |
Osvaldo | Retroviral | I | 2 | 2 | 0 | 0 |
Porto1 | non-LTR retrotransposon | I | 11 | 10 | 0 | 1 |
R2-element | non-LTR retrotransposon | I | 2 | 2 | 0 | 0 |
roo | Retroviral | I | 3 | 3 | 0 | 0 |
rooA | Retroviral | I | 1 | 1 | 0 | 0 |
rover | Retroviral | I | 1 | 1 | 0 | 0 |
Rt1b | non-LTR retrotransposon | I | 2 | 2 | 0 | 0 |
springer | Retroviral | I | 1 | 1 | 0 | 0 |
Stalker | Retroviral | I | 1 | 1 | 0 | 0 |
TAHRE | non-LTR retrotransposon | I | 1 | 1 | 0 | 0 |
Tirant | Retroviral | I | 2 | 2 | 0 | 0 |
Transpac | Retroviral | I | 7 | 5 | 1 | 1 |
X-element | non-LTR retrotransposon | I | 1 | 1 | 0 | 0 |
ZAM | Retroviral | I | 1 | 1 | 0 | 0 |
Bari1 | IR-elements | II | 1 | 1 | 0 | 0 |
Dhet\Uhu | IR-elements | II | 4 | 4 | 0 | 0 |
Dhyd\Minos | IR-elements | II | 1 | 1 | 0 | 0 |
Dmau\mariner | IR-elements | II | 14 | 13 | 2 | 1 |
hobo | IR-elements | II | 2 | 2 | 0 | 0 |
S-element | IR-elements | II | 1 | 1 | 0 | 0 |
S2 | IR-elements | II | 1 | 1 | 0 | 0 |
Tc1 | IR-elements | II | 1 | 1 | 0 | 0 |
Tc1-2 | IR-elements | II | 1 | 1 | 0 | 0 |
Tc3 | IR-elements | II | 1 | 1 | 0 | 0 |
Total | Â | Â | 191 | 173 | 13 | 9 |