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Table 1 List of transcripts modulated by DIMEB and reported in the Discussion

From: Grapevine cell early activation of specific responses to DIMEB, a resveratrol elicitor

IDa Description Uniprot IDb TC-IDc 2 h 6 h
     + + -
Signal trasduction
CLU090 Kinase associated protein phosphatase P46014 EC987592 x   
1608981_at Putative phospholipase Q8RXN7 TC69626   x  
1620080_at Putative receptor-like protein kinase ARK1 Q5ZAK8 CB922377   x  
1611172_at SOS2-like protein kinase Q8LK24 TC52484   x  
Transcription factors
1619311_at Pathogenesis-related genes transcriptional activator PTI5 O04681 TC55556   x  
1611285_s_at Probable WRKY transcription factor 11 Q9SV15 TC65678   x  
CLU059 TGA10 transcription factor Q52MZ2 TC99087 x   
1610775_s_at WRKY transcription factor-b Q5DJU0 TC55553   x  
Effector genes
Phe biosynthesis
CLU083 3-Deoxy-D-arabino-heptulosonate 7-phosphate synthase precursor O24051 TC74975 x   
1611211_at 3-Deoxy-D-arabino-heptulosonate 7-phosphate synthase precursor O24046 TC57386   x  
1614440_at 3-Deoxy-D-arabino-heptulosonate 7-phosphate synthase Q6YH16 TC54321   x  
1619357_at 3-Deoxy-D-arabino-heptulosonate 7-phosphate synthase O24046 TC57642   x  
1621405_at Plastidic 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 2 O22407 TC51974   x  
1609646_at 3-Dehydroquinate synthase-like protein Q9FKX0 TC56854   x  
1609932_at Prephenate dehydratase Q6JJ29 TC53641   x  
1621307_at Prephenate dehydratase Q6JJ29 TC53641   x  
1611895_at Putative chorismate mutase Q5JN19 TC62307   x  
General phenylpropanoid metabolism
1613113_at Phenylalanine ammonia lyase Q6UD65 TC60180    
CLU024 Trans-cinnamate 4-monooxygenase Q43240 TC71512 x   
1610821_at Cinnamic acid 4-hydroxylase Q948S8 TC70715   x  
1616191_s_at Cinnamic acid 4-hydroxylase Q948S8 TC70715   x  
1615801_at 4-Coumarate:CoA ligase Q5S017 TC60943   x  
1619320_at 4-Coumarate--CoA ligase 2 P31687 TC66743   x  
Stilbene biosynthesis
CLU009 Stilbene synthase Q9SPW2 TC89701 x   
CLU022 Stilbene synthase Q6BAU9 TC89632 x   
CLU023 Stilbene synthase P28343 TC84974 x   
CLU049 Stilbene synthase Q8LPP4 TC78210 x   
CLU097 Stilbene synthase Q9S982 TC84974 x   
CLU103 Stilbene synthase P28343 TC88894 x   
1606750_at Stilbene synthase Q6BAL2 TC67020   x  
1608009_s_at Stilbene synthase P51070    x  
1609696_x_at Stilbene synthase P28343 TC67020   x  
1609697_at Stilbene synthase Q944W7 TC60946   x  
1610824_s_at Stilbene synthase Q93YX5 TC52746   x  
1610850_at Stilbene synthase P28343    x  
1611190_s_at Resveratrol synthase Q94G58 TC67020   x  
1612804_at Stilbene synthase Q9SPW2 TC52746   x  
1614621_at Stilbene synthase P28343 TC67020   x  
1616575_at Stilbene synthase Q944W7 TC52746   x  
1620964_s_at Stilbene synthase P28343    x  
1622638_x_at Stilbene synthase Q9SPW2 TC52746   x  
Secondary metabolite transport
CLU106 PDR-like ABC transporter Q8GU88 TC76318 x   
CLU119 Pleiotropic drug resistance protein 12 Q5Z9S8 TC81892 x   
1613763_at ABC transporter-like protein Q9LYS2 TC60768   x  
1618493_s_at ABC transporter-like protein Q9LYS2 TC64210   x  
1610363_at CjMDR1 Q94IH6 TC69843   x  
1609330_at Glutathione S-transferase Q6YEY5 NP864091   x  
1611890_at Glutathione S-transferase GST 14 Q9FQE4 TC61062   x  
1619682_x_at Caffeic acid O-methyltransferase Q9M560 TC52364   x  
1620342_at Caffeic acid 3-O-methyltransferase 1 Q00763 TC64352   x  
Lignin biosynthesis
1611897_s_at Caffeoyl-CoA O-methyltransferase Q8H9B6 TC63685   x  
1614643_at Caffeoyl-CoA O-methyltransferase Q43237 TC51729   x  
1613900_at Cinnamyl alcohol dehydrogenase Q9ATW1 TC52904   x  
1614045_at Ferulate 5-hydroxylase Q6IV45 TC64493   x  
1614502_at Ferulate 5-hydroxylase Q6IV45 TC63764   x  
1619065_at Putative cinnamoyl-CoA reductase Q8W3H0 TC53437   x  
1622651_at Polyphenol oxidase Q68NI4 TC58764   x  
1610806_at Putative diphenol oxidase Q6Z8L2 CD007812   x  
CLU122 Chalcone-flavonone isomerase P51117 TC78712 x   
CLU048 Flavonol 3-O-glucosyltransferase 6 Q40288 TC85607 x   
1621051_at Flavonol 3-O-glucosyltransferase 2 Q40285 CN006197    x
Defence response
CLU088 Chitinase (Class II) Q43322 TC95665 x   
1613871_at Class IV chitinase Q9M2U5 TC57889   x  
1617192_at Class IV chitinase Q7XB39 TC63731   x  
1617430_s_at Basic endochitinase precursor P51613 TC51704   x  
CLU001 Pathogenesis-related protein10 Q9FS42 TC72098 x   
1610011_s_at Pathogenesis-related protein10 Q9FS42    x  
1618568_s_at Pathogenesis-related protein10 Q9FS42    x  
CLU021 Pathogenesis-related protein PR-4A precursor P29062 TC91296 x   
CLU036 Merlot proline-rich protein 2 Q6QGY1 TC85591 x   
1609875_at Protease inhibitor Q6YEY6    x  
1611666_s_at Protease inhibitor Q6YEY6 TC70006   x  
1612552_at Putative S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase Q9C9W8 TC57170   x  
1620309_at Putative S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase Q9C9W8 TC63451   x  
1622147_at 1-Aminocyclopropane-1-carboxylate oxidase 3 Q08507 TC60326   x  
1616358_at MLO-like protein 11 Q9FI00 BQ798612    x
Cell wall metabolism
1608074_s_at Expansin Q84UT0 TC62965    x
1620840_at Alpha-expansin Q8LKJ8 TC53122    x
1615995_at Xyloglucan endotransglycosylase XET2 Q9LLC2 CF212592    x
1620003_at Xyloglucan endotransglycosylase 1 Q9ZRV1 TC63269    x
1608799_at Pectin methylesterase Q96497 TC58800    x
1619468_at Pectin methylesterase PME1 Q94B16 TC53043    x
1619522_at Putative beta-galactosidase BG1 Q94B17 TC56838    x
1608756_at Polygalacturonase-like protein Q84LI7 TC59719    x
1606763_at Putative beta-1,3-glucanase Q8L868 TC67051    x
1609506_at Putative cellulase CEL2 Q94B13 NP596365    x
1610263_at Putative beta-1,3-glucanase Q8L868 TC67051    x
Cell duplication
1612320_a_at Tubulin alpha chain P33629 TC57547    x
1616815_at Tubulin beta-8 chain Q41785 TC55048    x
1618413_at Tubulin alpha chain P33629 TC63601    x
1619167_at Tubulin beta-8 chain Q41785 TC62643    x
1621015_at Alpha-tubulin 1 Q8H6M1 TC65238    x
1622466_at Tubulin beta-8 chain Q41785 TC62809    x
1608927_at Putative histone H2A Q6L500 TC53574    x
1612573_at Histone H3 A2Y533 TC56731    x
1613041_at Histone H4 Q76H85 TC61904    x
1613076_at Histone H4 Q76H85 TC62637    x
1620332_at Histone H3 A2Y533 TC59489    x
1622440_at Histone H3 A2Y533 TC64779    x
1622737_at Histone H2B O22582 TC64405    x
1610854_at Proliferating cell nuclear antigen P22177 TC54817    x
1610422_at Patellin-6 Q9SCU1 TC61622    x
1610607_at Gip1-like protein Q93WR4 TC66111    x
1613373_at Formin-like protein 1 Q8S0F0 TC55249    x
1607792_at Putative DNA polymerase alpha catalytic subunit O48653 TC59012    x
  1. aCluster or Affy ID of transcripts modulated at 2 or 6 h. (+) and (-) refer to up- and down-regulation in the treated sample with respect to the control.
  2. bUniprotID [73]of the first hit obtained by “Blast” analysis.
  3. cTC: corresponding grapevine Tentative Consensus sequence obtained by a search (BlastN) against the Grape Gene Index database [75].