TY - JOUR AU - Amaral, Andreia J. AU - Megens, Hendrik-Jan AU - Kerstens, Hindrik HD AU - Heuven, Henri CM AU - Dibbits, Bert AU - Crooijmans, Richard PMA AU - den Dunnen, Johan T. AU - Groenen, Martien AM PY - 2009 DA - 2009/08/12 TI - Application of massive parallel sequencing to whole genome SNP discovery in the porcine genome JO - BMC Genomics SP - 374 VL - 10 IS - 1 AB - Although the Illumina 1 G Genome Analyzer generates billions of base pairs of sequence data, challenges arise in sequence selection due to the varying sequence quality. Therefore, in the framework of the International Porcine SNP Chip Consortium, this pilot study aimed to evaluate the impact of the quality level of the sequenced bases on mapping quality and identification of true SNPs on a large scale. SN - 1471-2164 UR - https://doi.org/10.1186/1471-2164-10-374 DO - 10.1186/1471-2164-10-374 ID - Amaral2009 ER -