From: Application of massive parallel sequencing to whole genome SNP discovery in the porcine genome
Data 12 | Data 15 | Data 20 | |
---|---|---|---|
Total sequences after filtering | 45,498,558 | 41,610,684 | 34,061,918 |
Total number of SNPs | 16,768 | 17,047 | 17,489 |
Mapping qualitya | 61.76 (0.027) | 61.78 (0.027) | 62.02 (0.0237) |
Consensus qualitya | 59.04 (0.257) | 60.23 (0.259) | 63.30 (0.263) |
Target coveragea | 29.37 (0.164) | 29.19 (0.163) | 28.60 (0.155) |
MAFa, b | 0.36 (0.0007) | 0.36 (0.0007) | 0.36 (0.0007) |