From: Application of massive parallel sequencing to whole genome SNP discovery in the porcine genome
Data 12 # SNPs = 68 | Data 12 & Data 15 # SNPs = 147 | Data 20 # SNPs = 48 | All* # SNPs = 2,879 | ||||||
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Breed | # Genotyped Animals | Monomorphic (%) | Average MAF | Monomorphic (%) | Average MAF | Monomorphic (%) | Average MAF | Monomorphic (%) | Average MAF |
Duroc | 82 | 34 | 0.13 | 28 | 0.16 | 17 | 0.17 | 29 | 0.13 |
Large White | 136 | 13 | 0.23 | 7 | 0.24 | 8 | 0.28 | 5 | 0.24 |
Landrace | 80 | 12 | 0.22 | 12 | 0.20 | 17 | 0.20 | 11 | 0.21 |
Pietrain | 90 | 16 | 0.19 | 12 | 0.22 | 10 | 0.26 | 12 | 0.22 |
Berkshire | 67 | 32 | 0.14 | 31 | 0.14 | 21 | 0.18 | 28 | 0.14 |
Hampshire | 59 | 28 | 0.15 | 28 | 0.16 | 23 | 0.17 | 27 | 0.16 |
Wild boar | 20 | 34 | 0.17 | 25 | 0.19 | 17 | 0.20 | 23 | 0.18 |
PW | 6 | 13 | 0.27 | 6 | 0.33 | 6 | 0.37 | 4 | 0.33 |