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Table 1 Differentially Expressed Genes between Clark and IsoClark Genotypes Grown Under Iron Sufficient Conditions

From: Integrating microarray analysis and the soybean genome to understand the soybeans iron deficiency response

Affymetrix Probe ID

Fold Change

UniProt ID

Plant GOSlim AtHomolog

PlantGOSlim

GmaAffx.93650.1.S1_s_at

-12.383

Q6WE90

No Homolog

 

Gma.12096.1.A1_at

-9.9

No UniProt

No Homolog

 

Gma.18.1.S1_at

-9.416

Q39819

AT4G10250

response to stress

Gma.17141.1.S1_at

-8.776

Q9ZSA7

AT4G10490

other metabolic

Gma.14554.1.S1_at

-7.959

Q1SJ63

  

GmaAffx.62046.1.S1_at

-5.922

Q5CAZ5

AT1G34210

developmental

Gma.2185.3.S1_at

-5.724

Q9FJL3

AT3G25230

response to stress

Gma.10282.1.A1_at

-5.591

Q1T3Y4

AT4G27670

response to stress

GmaAffx.90956.1.S1_s_at

-5.297

No UniProt

AT5G53740

biological process

Gma.11793.1.S1_at

-3.469

No UniProt

No Homolog

 

GmaAffx.89665.1.A1_s_at

-3.365

Q9AY32

No Homolog

 

Gma.12660.1.A1_at

-3.173

Q8H2B1

AT1G56300

protein metabolism

Gma.10282.2.S1_at

-2.899

Q1T3Y4

AT4G27670

response to stress

GmaAffx.93424.1.S1_x_at

-2.884

Q9S7H2

AT5G20620

protein metabolism

GmaAffx.56241.2.S1_at

-2.739

Q9SCW4

AT5G62020

transcription

Gma.8636.1.S1_at

-2.459

O80982

AT2G26150

transcription

GmaAffx.72322.1.S1_at

-2.32

Q7F1F2

AT5G48570

protein metabolism

Gma.1727.1.S1_at

-2.297

Q1SVQ0

AT2G39730

response to abiotic or biotic stimulus

GmaAffx.5924.1.S1_at

-2.295

Q8L7T2

AT1G52560

response to stress

GmaAffx.74022.1.S1_at

-2.267

Q1RY14

AT4G28480

protein metabolism

GmaAffx.93424.1.S1_s_at

-2.261

Q9S7H2

AT5G20620

protein metabolism

  1. Fold Change between Iron Sufficient and Iron Deficient: Change in expression levels between Clark and IsoClark plants grown in iron sufficient conditions. A negative fold change is a down regulation of gene expression in the IsoClark genotype in comparison to the Clark genotype.
  2. UniProt ID: Identifier for the UniProt sequence most similar to the consensus sequence used to create the Affymetrix probe set
  3. Plant GO Slim At Homolog: The Arabidopsis homolog of the soybean consensus sequence represented by the Affymetrix probe set.
  4. Plant GO Slim: The GO Slim annotation for the identified Arabidopsis homolog.