Table 2 Biological processes over-represented (p < 0.05) in domesticated G. hirsutum and domesticated G. barbadense relative to their wild forms.
Domesticated species | GO term | |
|---|---|---|
| Â | up-regulated | down-regulated |
G. hirsutum | antioxidant activity (Chl-APX, GST, CAT, TRX) | regulation of O2-/H2O2 production process (NADPH oxidase) |
| Â | glutathione transferase activity (GSTs) | glycolate oxidase activity (GOX) |
| Â | Glycoside hydrolase activity(GLH) | cyclin-dependent protein kinase inhibitor activity |
| Â | peroxidase activity (APX, GST, CAT) | jasmonic acid and ethylene-dependent systemic resistance |
| Â | glutathione S-conjugate-exporting ATPase activity | Â |
| Â | removal of superoxide radicals (TRX) | Â |
| Â | oxidoreductase activity, acting on peroxides (APX, GST, CAT) | Â |
| Â | voltage-gated calcium channel activity (two pore Ca+ channels) | Â |
G. barbadense | response to stress (ESP, PRX, GH3-like) | superoxide dismutase activity (Cu/Zn SOD) |
| Â | peroxidase activity (PRX) | carotenoid biosynthetic process (GPS) |
| Â | antioxidant activity (Chl-APX, PRX) | ent-kaurene oxidase activity (CYP450) |
| Â | regulation of epoxide hydrolase activity (EPH) | oxygen and reactive oxygen species metabolic process (SOD) |
| Â | voltage-gated calcium channel activity (two pore Ca+ channels) | photosystem II reaction center |
| Â | MAP kinase activity (MAPK1, WIPK) | Â |
| Â | receptor signaling protein serine/threonine kinase activity (MAK, MAPKs) | Â |
| Â | jasmonic acid mediated signaling pathway (GH3- -like) | Â |
| Â | glycolate oxidase activity (GOX) | Â |