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Table 1 Features of sHsps and Acds genes of rice

From: Rice sHsp genes: genomic organization and expression profiling under stress and development

Protein name Gene ID
(TIGR)
Chromosome location and orientation Intron* FL-cDNA
sHsps  
Hsp16.6-CVIII Os01g04340 1: (+) 1933247–1933699 NI AK063681
Hsp17.9B-CIX Os01g04350 1: (+) 1940149–1940649 NI AK119599, AK064849,
AK065690, AK062091
Hsp16.9C-CI Os01g04360 1: (-) 1943473–1943922 NI n/a
Hsp16.9A-CI Os01g04370 1: (-) 1948005–1948457 NI n/a
Hsp16.9B-CI Os01g04380 1: (+) 1951047–1951499 NI AK121025
Hsp18.0-CII Os01g08860 1: (-) 4448290–4448790 NI AK071240, DQ180746
Hsp18.8-CX Os02g03570 2: (+) 1450233–1450766 NI n/a
Hsp23.6-MII Os02g10710 2: (-) 5639315–5640360 SI [97(386n)122] AK106682
Hsp19.0-CII Os02g12610 2: (-) 6616538–6617065 NI CT835445
Hsp17.8-CXI Os02g48140.1
Os02g48140.2
2: (+) 30355328–30355822 NI CI140562
AK107963
Hsp24.0-MI Os02g52150 2: (+) 32807782–32808549 SI [83(105n)137] AK105464, AK074003,
AK064389
Hsp18.6-CIII Os02g54140 2: (+) 34066403–34067009 SI [82(87n)90] AK119261, AK063602
Hsp26.7-P Os03g14180 3: (+) 7746457–7747179 NI AK063618, AK120045,
AK120048, AB020973
Hsp17.9A-CI Os03g15960 3: (+) 8856447–8856932 NI AK104129, AK119616,
AK119664, AK073671,
AK119239, AK119675
Hsp17.4-CI Os03g16020 3: (-) 8884576–8885040 NI AK119243, AK119717
Hsp18.0-CI Os03g16030 3: (+) 8885608–8886093 NI n/a
Hsp17.7-CI Os03g16040 3: (+) 8888694–8889173 NI AK069547
Hsp23.2-ER Os04g36750 4: (+) 22300635–22301282 NI AK063700
Hsp22.3-CVI Os05g42120 5: (+) 24674434–24675920 SI [111(875n)92] AK110627
Hsp26.2-MI Os06g11610 6: (-) 6151339–6152222 SI [103(137n)145] n/a
Hsp16.0-Px Os06g14240 6: (-) 7940169- 7940609 NI AK105317
Hsp18.8-CV Os07g33350.1
Os07g33350.2
7: (+) 20595735–20596341 SI [73(85n)100] AK099296
AK063798
Hsp21.8-ER Os11g13980 11: (-) 7752380–7753000 NI AK107883
Acds     
Acd18.1 Os01g40530 1: (-) 24554327–24555689 SI n/a
Acd29.4 Os01g40550 1: (-) 24558012–24558960 SI AK109917
Acd58.3 Os01g62300 1: (-) 37800329–37801894 NI AK069954, AK103961
Acd52.9 Os02g48370 2: (-) 30498592–30502991 MI AK107036
Acd19.1 Os03g61940 3: (-) 35964494–35965033 NI n/a
Acd41.4 Os03g45330 3: (-) 26352936–26356577 SI n/a
Acd31.8 Os03g45340 3: (-) 26360084–26361059 SI AK062338
Acd22.6 Os03g06170 3: (-) 3074366–3075216 SI n/a
Acd34.9 Os05g51440 5: (+) 29576192–29577284 SI n/a
Acd50.4 Os06g41730 6: (+) 25891207–25895963 MI AK073058, AK099075,
AK101550, AK064549
Acd21.5 Os09g17660 9: (+) 11366789–11367960 SI n/a
Acd38.4 Os10g07200 10: (-) 3758835–3760441 SI AK064267
Acd21.0 Os10g07210 10: (-) 3764967–3766298 SI AK107162
Acd18.0 Os10g30162 10: (+) 16138850–16140552 SI AK062774
Acd19.4 Os10g30180 10: (+) 16145983–16147060 SI n/a
Acd50.7 Os12g06820 12: (-) 3316867–3318361 SI AK110577
Acd30.2 n/a n/a   AK109077
  1. n/a – not available, NI – no intron, SI – single intron, MI – multiple introns, C – cytoplasm/nuclear, M – mitochondria, ER – endoplasmic reticulum, P – chloroplast, Px – peroxisome. * The number in bracket shows the intron length in nucleotides. Numbers preceding and following the bracket represent exon1 and exon2 (in amino acids), respectively.