Table 3 Q-PCR expression data for relevant validated genes

rus operon

AFE_3146

rus

rusticyanin

3,8

Fe

ATCC 33020/[7]

CCM 4253/[24]

ATCC 19859/[25]

AFE_3151

cup

conserved hypothetical protein

4,9

Fe

ATCC 33020/[7]

Cytochrome c oxidase complex biogenesis operon

AFE_3141

ctaR

iron responsive regulator of the Rrf2 family

3,9

Fe

Sensor/regulator two-component signal transduction system

AFE_3137

regA

DNA-binding response regulator

4,3

Fe

petI operon

AFE_3108

sdrA1

oxidoreductase, short-chain dehydrogenase/reductase family

3,7

Fe

AFE_3109

petA1

ubiquinol-cytochrome c reductase, iron-sulfur subunit

6,4

Fe

CCM 4252/[24]

AFE_3110

petB1

ubiquinol-cytochrome c reductase, cytochrome b subunit

5,7

Fe

AFE_3111

petC1

ubiquinol-cytochrome c reductase, cytochrome c 1 subunit

5,5

Fe

Others

AFE_2599

-

1,2

Fe

AFE_3116

-

1,2

Fe

AFE_3119

-

3,4

Fe

AFE_3124

cysD

sulfate adenylyltransferase, small subunit

4,8

Fe

CCM 4253/[24]

Thiosulfate-quinone oxidoreductase complex operon

AFE_0043

-

periplasmic solute-binding protein, putative

-2,5

S

CCM 4253/[24]

ATCC 19859/[25]

ATCC 23270/[29]

AFE_0045

-

sulfur/pyrite/thiosulfate/sulfide-induced protein

-1,2

S

ATCC 19859/[25]

ATCC 19859/[28]

Cytochrome bd ubiquinol oxidase

AFE_0955

cydA

cytochrome d ubiquinol oxidase, subunit I

-2,0

S

Cytochrome bo 3 ubiquinol oxidase

AFE_0632

cyoB

cytochrome o ubiquinol oxidase, subunit I

-3,2

S

Heterodisulfide reductase complex operon

AFE_2553

hdrA

pyridine nucleotide-disulfide oxidoreductase

-1,3

S

AFE_2555

hdrC

iron-sulfur cluster-binding protein

-1,6

S

AFE_2586

hdrB

heterodisulfide reductase subunit B, homolog

-0,8

S

Sulfide-quinone reductase

AFE_1792

sqr

Sulfide-quinone reductase

-0,1

≈

CCM 4253/[24]

NASF-1/[26]

Others

AFE_0049

-

periplasmic solute-binding protein, putative

0,3

≈

ATCC 23270/[29]

AFE_1663

glcF

glycolate oxidase, iron-sulfur subunit

-1,7

S

AFE_1677

cbbOIa

von Willebrand factor type A domain protein

-1,9

S

AFE_2971

cysN2

sulfate adenylyltransferase, large subunit

-1,3

S

AFE_0282

fur

ferric uptake regulator

0,6

≈

AFE_2324

pgm

phosphoglucomutase

0,6

≈

AFE_0445

galU

UTP-glucose-1-phosphate uridylyltransferase

0,2

≈

AFE_1342

epsS

UDP-glucose 4-epimerase

0,0

≈

AFE_2840

malQ

glycosyl hydrolase

-0,2

≈

AFE_2836

glbB

1,4-alpha-glucan branching enzyme

-0,6

≈

AFE_3054

cbbOIb

von Willebrand factor type A domain protein

-0,1

≈

AFE_2157

cbbOII

von Willebrand factor type A domain protein

-0,6

≈

AFE_0539

cysN3

sulfate adenylyltransferase, large subunit

0,1

≈

AFE_2602

-

hypothetical

-0,1

≈

ATCC 19859/[25]