Table 4 Proteins encoded by the draft Pta 11528 genome that have no detectable homologues on three previously fully sequenced P. syringae genomes.
Genomic coordinates | Locus tag | Length (amino acids) | Predicted function (FgenesB automated annotation) |
|---|---|---|---|
122:73423..74418 | C1E_0355 | 331 | Glycosyltransferase involved in cell wall biogenesis |
122:82519..83649 | C1E_0361 | 376 | Glycosyltransferase |
195:60030..60371 | C1E_0654 | 113 | Integrase |
195:63783..67199 | C1E_0659 | 1138 | ATP-binding protein |
195:67192..68034 | C1E_0660 | 280 | Phosphoadenosine phosphosulfate reductase |
195:68040..68927 | C1E_0661 | 295 | Serine/threonine protein kinase |
256:43490..44116 | C1E_0901 | 208 | TetR family ranscriptional regulator. 49% amino acid sequence identity to G. bethesdensis GbCGDNIH1_1777 [70]. |
256:45146..46300 | C1E_0903 | 384 | Hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
419:2876..4135 | C1E_1014 | 419 | Biotin carboxylase |
419:12230..12925 | C1E_1023 | 231 | Tabtoxin biosynthesis enzyme, TblA |
419:14223..15053 | C1E_1025 | 276 | Tetrahydrodipicolinate N-succinyltransferase |
554:156634..157137 | C1E_1426 | 167 | Histone acetyltransferase HPA2 |
554:289047..290207 | C1E_1572 | 386 | Integrase |
554:300540..302342 | C1E_1580 | 600 | P-loop ATPase |
661:62161..62487 | C1E_1896 | 108 | Amine oxidase, flavin-containing |
672:22725..23156 | C1E_1956 | 143 | Rhs family protein |
672:25358..25786 | C1E_1961 | 142 | RHS protein |
672:118239..118676 | C1E_2056 | 145 | Xenobiotic response element family of transcriptional regulator. 37% amino acid sequence identity to Xylella fastidiosa PD0954 [81]. |
672:276912..277349 | C1E_2209 | 145 | Histone acetyltransferase HPA2 |
679:1273..1647 | C1E_2227 | 124 | Similar to Mucin-1 precursor (MUC-1) |
679:22846..23553 | C1E_2251 | 235 | Site-specific recombinases, DNA invertase Pin homologs |
679:27901..29442 | C1E_2260 | 513 | Phage integrase |
679:50793..51164 | C1E_2286 | 123 | LacI family transcriptional regulator. 57% amino acid sequence identity to Rhizobium leguminosarum plasmid-encoded pRL1201 [82]. |
679:95310..95744 | C1E_2329 | 144 | Tfp pilus assembly protein, major pilin PilA. 42% amino acid sequence identity to P. aeruginosa UniProt:P17838 [74]. |
684:105988..106806 | C1E_2502 | 272 | Histone acetyltransferase HPA2 |
684:114136..118092 | C1E_2506 | 1318 | NTPase (NACHT family) |
684:137829..138611 | C1E_2527 | 260 | Permeases of the major facilitator superfamily |
684:150262..150585 | C1E_2541 | 107 | Short-chain dehydrogenase/reductase SDR |
684:151896..152792 | C1E_2545 | 298 | Nucleoside-diphosphate-sugar |
684:160330..161241 | C1E_2553 | 303 | Gluconolactonase |
684:166181..167533 | C1E_2556 | 450 | ASPIC/UnbV domain-containing protein |
684:174586..174987 | C1E_2563 | 133 | Xenobiotic response element family of transcriptional regulator. 38% amino acid sequence identity to P. aeruginosa PACL_0260 [83]. |
684:178452..178925 | C1E_2570 | 157 | Cro/CI family transcriptional regulator. 36% amino acid sequence identity to Pto DC3000 PSPTO_2855 [18]. |
684:192825..193367 | C1E_2584 | 180 | Methyl-accepting chemotaxis sensory transducer (C terminus) |
684:193364..193720 | C1E_2585 | 118 | Methyl-accepting chemotaxis sensory transducer (N terminus) |
684:197314..198498 | C1E_2589 | 394 | Dienelactone hydrolase |
891:113887..115026 | C1E_3396 | 379 | Pectate lyase |
891:121799..122809 | C1E_3401 | 336 | Type II secretory pathway, component PulK |
955:27327..28100 | C1E_3914 | 257 | DNA-binding HTH domain-containing |
955:37638..38900 | C1E_3925 | 420 | Outer membrane efflux protein |
955:67953..68687 | C1E_3957 | 244 | Plasmid stability protein |
1053:122043..123497 | C1E_4568 | 484 | Phage integrase family protein |
1053:127685..128557 | C1E_4572 | 290 | Superfamily I DNA or RNA helicase |
1053:130636..131022 | C1E_4576 | 128 | ATP-dependent DNA helicase, UvrD/Rep family |
1053:363558..364328 | C1E_4802 | 256 | Thermostable 8-oxoguanine DNA glycosylase |
1053:364986..365591 | C1E_4804 | 201 | PP-loop superfamily ATPase |
1053:365588..366790 | C1E_4805 | 400 | Sugar kinase, ribokinase |
1053:371237..371890 | C1E_4809 | 217 | Restriction endonuclease |
1053:384339..385847 | C1E_4823 | 502 | ATPase |
1053:387166..387564 | C1E_4827 | 132 | ATP-dependent DNA helicase, UvrD/Rep family |
1053:403085..403480 | C1E_4845 | 131 | ATP-dependent DNA helicase, UvrD/Rep family |
1053:405835..406488 | C1E_4849 | 217 | Restriction endonuclease |
1087:462184..462693 | C1E_5459 | 169 | Histone acetyltransferase HPA2 |
1087:463060..463650 | C1E_5461 | 196 | Phage collar protein |
1087:464015..464851 | C1E_5462 | 278 | Sulfotransferase |
1087:466231..466944 | C1E_5464 | 237 | S-layer domain protein |
1087:466941..471797 | C1E_5465 | 1618 | Pyrrolo-quinoline quinone |
1102:92687..93796 | C1E_5711 | 369 | Major facilitator superfamily (MFS) permease |
1102:97423..98163 | C1E_5715 | 246 | IclR-like transcriptional regulator. 62% amino acid sequence identity to Acinetobacter baumanii ACICU_01897 [84]. |
1160:302149..302877 | C1E_6026 | 242 | Nitroreductase |
1160:303074..303616 | C1E_6027 | 180 | TetR family transcriptional regulator. 56% amino acid sequence identity to Ralstonia solanacearum RSc0820 [85]. |