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Table 3 Comparison of substitution frequencies of SNPs deposited in dbSNP [4] and polymorphisms identified in shotgun sequences.

From: Mining for single nucleotide polymorphisms in pig genome sequence data

    Shotgun sequence analysis
  dbSNP (genomic) SNP redundancy = 1 SNP redundancy = 2
Transitions 5404 73,04% 64167 65,38% 4676 73,36%
Transversions 1995 26,96% 33984 34,62% 1698 26,64%
Total 7399   98151   6374