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Table 2 Shared stress response to heat, cold and high salinity: Results for repressed genes shown

From: Transcriptional response of the model planctomycete Rhodopirellula baltica SH1T to changing environmental conditions

ID AA Product IEP Strand Potentially involved in/Comments
RB61 58 hypothetical protein 9.6 +  
RB314 309 malonyl CoA-acyl carrier protein transacylase 4.4 +  
RB318 81 Acyl carrier protein 3.7 +  
RB319 95 hypothetical protein 10.2 + fatty acid process
RB767 311 conserved hypothetical protein, secreted 5.7 +  
RB825 117 hypothetical protein 7.8 -  
RB951 234 protein containing DUF1596 12.3 -  
RB1129 895 conserved hypothetical protein 5.8 - (S) bombinin, defense response
RB1233 206 30S ribosomal protein S4 11.2 -  
RB2105 470 membrane protein 9.6 -  
RB2306 41 hypothetical protein 9 +  
RB2479 273 conserved hypothetical protein 5.5 -  
RB3277 221 hypothetical protein 10.4 -  
RB3362 87 hypothetical protein 11.9 -  
RB3366 78 hypothetical protein 5.6 +  
RB3394 36 hypothetical protein 10.5 +  
RB3399 65 hypothetical protein 9.7 -  
RB3575 152 membrane protein 10.1 + [21]
RB3603 344 secreted protein 4.6 -  
RB3675 742 secreted protein 8.4 +  
RB3688 53 hypothetical protein 9.3 -  
RB3880 82 hypothetical protein 10.7 -  
RB3953 857 hypothetical protein 5.2 -  
RB3981 161 hypothetical protein 4.1 +  
RB3994 191 hypothetical protein 4.1 +  
RB4097 733 conserved hypothetical protein 6.2 +  
RB4145 90 hypothetical protein 12 -  
RB4194 53 hypothetical protein 11.4 - next to a seronine/threonine kinase
RB4269 282 glutamic acid specific endopeptidase 5.6 -  
RB4358 123 hypothetical protein 6.5 - [24, 66]
RB4373 109 hypothetical protein 4.8 -  
RB4657 123 hypothetical protein 12.2 +  
RB4951 95 hypothetical protein 12.1 +  
RB5262 95 membrane protein 6.3 +  
RB5409 97 hypothetical protein 12.7 +  
RB5415 62 hypothetical protein 12.3 +  
RB5745 130 hypothetical protein 10.7 - genetic information processing
RB6092 361 Peptidase M50 9.6 +  
RB6158 142 hypothetical protein 6 -  
RB6174 69 hypothetical protein 10.6 -  
RB6276 105 Histone-like bacterial DNA-binding protein 10.4 -  
RB6634 365 protein containing DUF1559 5.3 +  
RB6699 47 hypothetical protein 11.1 +  
RB6766 55 hypothetical protein 12 +  
RB6849 101 hypothetical protein 12.8 -  
RB7042 91 hypothetical protein 10.4 +  
RB7116 59 hypothetical protein 11.7 + ribosomal machinery
RB7117 181 Ribosomal protein L35 11.4 -  
RB7557 327 von Willebrand factor type A domain protein 4.9 +  
RB7646 62 hypothetical protein 10.5 +  
RB7647 73 hypothetical protein 7.4 +  
RB7837 286 Ribosomal protein L2 11.8 +  
RB7838 89 Ribosomal protein S19/S15 10.8 +  
RB7839 119 Ribosomal protein L22/L17 11 +  
RB7840 236 30S ribosomal protein S3 10.4 +  
RB7841 138 Ribosomal protein L16 11.1 +  
RB7849 108 Ribosomal protein S17 10 +  
RB7850 122 Ribosomal protein L14b/L23e 11 +  
RB7852 196 50S ribosomal protein L5 10.4 +  
RB7854 61 Ribosomal protein S14 11.8 +  
RB7856 181 50S ribosomal protein L6 10 +  
RB7857 149 Ribosomal protein L18P/L5E 11.6 +  
RB7859 177 Ribosomal protein S5 10.6 +  
RB7894 398 translation elongation factor EF-Tu 5.2 + [24, 66]
RB7899 141 50S ribosomal protein L11 9.6 +  
RB8119 142 hypothetical protein 10.1 +  
RB8457 113 hypothetical protein 11.5 -  
RB8594 41 hypothetical protein 9.2 +  
RB8669 37 hypothetical protein 11.5 + ribosomal machinery
RB9343 59 hypothetical protein 11.4 +  
RB9417 103 hypothetical protein 10.5 +  
RB9460 79 hypothetical protein 10.3 -  
RB9872 67 hypothetical protein 5.4 + cell division related
RB10581 384 secreted protein containing DUF1559 6.2 + [24]
RB11287 75 hypothetical protein 9.1 +  
RB11392 148 conserved hypothetical protein 5 +  
RB11490 181 conserved hypothetical protein, membrane 10.3 +  
RB11707 83 conserved hypothetical protein 9.8 + stress function
RB11766 129 hypothetical protein 10.4 + [46]
RB12193 36 hypothetical protein 7.5 - overlapping with asnB (RB12191)
RB12251 567 RNA polymerase specialized sigma factor 9.4 -  
RB12327 686 TGF-beta receptor, type I/II extracellular region 4.5 -  
RB12329 110 conserved hypothetical protein, membrane 4 +  
RB12396 57 hypothetical protein 11.3 -  
RB12454 199 hypothetical protein 10.3 -  
RB12818 163 conserved hypothetical protein 11.7 - ribosomal machinery
RB12821 117 Ribosomal protein L19 11.1 -  
RB12824 146 Ribosomal protein S16 5.3 -  
RB12837 65 hypothetical protein 9.8 + ribosomal machinery
RB12839 225 Ribosomal protein L1 9.8 +  
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BMC Genomics

ISSN: 1471-2164

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