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Table 2 Shared stress response to heat, cold and high salinity: Results for repressed genes shown

From: Transcriptional response of the model planctomycete Rhodopirellula baltica SH1T to changing environmental conditions

ID

AA

Product

IEP

Strand

Potentially involved in/Comments

RB61

58

hypothetical protein

9.6

+

 

RB314

309

malonyl CoA-acyl carrier protein transacylase

4.4

+

 

RB318

81

Acyl carrier protein

3.7

+

 

RB319

95

hypothetical protein

10.2

+

fatty acid process

RB767

311

conserved hypothetical protein, secreted

5.7

+

 

RB825

117

hypothetical protein

7.8

-

 

RB951

234

protein containing DUF1596

12.3

-

 

RB1129

895

conserved hypothetical protein

5.8

-

(S) bombinin, defense response

RB1233

206

30S ribosomal protein S4

11.2

-

 

RB2105

470

membrane protein

9.6

-

 

RB2306

41

hypothetical protein

9

+

 

RB2479

273

conserved hypothetical protein

5.5

-

 

RB3277

221

hypothetical protein

10.4

-

 

RB3362

87

hypothetical protein

11.9

-

 

RB3366

78

hypothetical protein

5.6

+

 

RB3394

36

hypothetical protein

10.5

+

 

RB3399

65

hypothetical protein

9.7

-

 

RB3575

152

membrane protein

10.1

+

[21]

RB3603

344

secreted protein

4.6

-

 

RB3675

742

secreted protein

8.4

+

 

RB3688

53

hypothetical protein

9.3

-

 

RB3880

82

hypothetical protein

10.7

-

 

RB3953

857

hypothetical protein

5.2

-

 

RB3981

161

hypothetical protein

4.1

+

 

RB3994

191

hypothetical protein

4.1

+

 

RB4097

733

conserved hypothetical protein

6.2

+

 

RB4145

90

hypothetical protein

12

-

 

RB4194

53

hypothetical protein

11.4

-

next to a seronine/threonine kinase

RB4269

282

glutamic acid specific endopeptidase

5.6

-

 

RB4358

123

hypothetical protein

6.5

-

[24, 66]

RB4373

109

hypothetical protein

4.8

-

 

RB4657

123

hypothetical protein

12.2

+

 

RB4951

95

hypothetical protein

12.1

+

 

RB5262

95

membrane protein

6.3

+

 

RB5409

97

hypothetical protein

12.7

+

 

RB5415

62

hypothetical protein

12.3

+

 

RB5745

130

hypothetical protein

10.7

-

genetic information processing

RB6092

361

Peptidase M50

9.6

+

 

RB6158

142

hypothetical protein

6

-

 

RB6174

69

hypothetical protein

10.6

-

 

RB6276

105

Histone-like bacterial DNA-binding protein

10.4

-

 

RB6634

365

protein containing DUF1559

5.3

+

 

RB6699

47

hypothetical protein

11.1

+

 

RB6766

55

hypothetical protein

12

+

 

RB6849

101

hypothetical protein

12.8

-

 

RB7042

91

hypothetical protein

10.4

+

 

RB7116

59

hypothetical protein

11.7

+

ribosomal machinery

RB7117

181

Ribosomal protein L35

11.4

-

 

RB7557

327

von Willebrand factor type A domain protein

4.9

+

 

RB7646

62

hypothetical protein

10.5

+

 

RB7647

73

hypothetical protein

7.4

+

 

RB7837

286

Ribosomal protein L2

11.8

+

 

RB7838

89

Ribosomal protein S19/S15

10.8

+

 

RB7839

119

Ribosomal protein L22/L17

11

+

 

RB7840

236

30S ribosomal protein S3

10.4

+

 

RB7841

138

Ribosomal protein L16

11.1

+

 

RB7849

108

Ribosomal protein S17

10

+

 

RB7850

122

Ribosomal protein L14b/L23e

11

+

 

RB7852

196

50S ribosomal protein L5

10.4

+

 

RB7854

61

Ribosomal protein S14

11.8

+

 

RB7856

181

50S ribosomal protein L6

10

+

 

RB7857

149

Ribosomal protein L18P/L5E

11.6

+

 

RB7859

177

Ribosomal protein S5

10.6

+

 

RB7894

398

translation elongation factor EF-Tu

5.2

+

[24, 66]

RB7899

141

50S ribosomal protein L11

9.6

+

 

RB8119

142

hypothetical protein

10.1

+

 

RB8457

113

hypothetical protein

11.5

-

 

RB8594

41

hypothetical protein

9.2

+

 

RB8669

37

hypothetical protein

11.5

+

ribosomal machinery

RB9343

59

hypothetical protein

11.4

+

 

RB9417

103

hypothetical protein

10.5

+

 

RB9460

79

hypothetical protein

10.3

-

 

RB9872

67

hypothetical protein

5.4

+

cell division related

RB10581

384

secreted protein containing DUF1559

6.2

+

[24]

RB11287

75

hypothetical protein

9.1

+

 

RB11392

148

conserved hypothetical protein

5

+

 

RB11490

181

conserved hypothetical protein, membrane

10.3

+

 

RB11707

83

conserved hypothetical protein

9.8

+

stress function

RB11766

129

hypothetical protein

10.4

+

[46]

RB12193

36

hypothetical protein

7.5

-

overlapping with asnB (RB12191)

RB12251

567

RNA polymerase specialized sigma factor

9.4

-

 

RB12327

686

TGF-beta receptor, type I/II extracellular region

4.5

-

 

RB12329

110

conserved hypothetical protein, membrane

4

+

 

RB12396

57

hypothetical protein

11.3

-

 

RB12454

199

hypothetical protein

10.3

-

 

RB12818

163

conserved hypothetical protein

11.7

-

ribosomal machinery

RB12821

117

Ribosomal protein L19

11.1

-

 

RB12824

146

Ribosomal protein S16

5.3

-

 

RB12837

65

hypothetical protein

9.8

+

ribosomal machinery

RB12839

225

Ribosomal protein L1

9.8

+