Table 1 Descriptive statistics for pair-wise comparison of neighboring genes according to orientation of transcription
From: Positive correlation between gene coexpression and positional clustering in the zebrafish genome
Pearson's correlation coefficient (R) | Intergenic distance (bp) | |||||
|---|---|---|---|---|---|---|
Orientation | N | Mean R ± se | Median R | Mean bp ± se | Median bp | |
Analyzed with full dataset | ← → | 1681 | 0.0637 ± 0.0084 | 0.0238 | 215221.3 ± 7887.2 | 88957 |
→ →/← ← | 3418 | 0.0877 ± 0.0061 | 0.0547 | 201669.6 ± 5611.0 | 75199 | |
→ ← | 1678 | 0.0592 ± 0.0082 | 0.0238 | 207196.8 ± 8385.1 | 75805 | |
Analyzed w/o tandem duplicates | ← → | 1635 | 0.0618 ± 0.0086 | 0.0220 | 219869.4 ± 8382.6 | 91546 |
→ →/← ← | 3295 | 0.0762 ± 0.0061 | 0.0438 | 209041.5 ± 5714.5 | 82818 | |
→ ← | 1632 | 0.0594 ± 0.0083 | 0.0250 | 216217.3 ± 8729.1 | 80961 | |