Table 5 Number of neighboring gene pairs found in clusters in different -lg p-value intervals (D = 25K).
From: Positive correlation between gene coexpression and positional clustering in the zebrafish genome
| Â | Transcription orientation | Number of gene pairs within -lg p-value range | ||||||
|---|---|---|---|---|---|---|---|---|
| Â | Â | 0~1 | 1~2 | 2~3 | 3~4 | 4~5 | 5~6 | 6~ |
Analyzed with full dataset | All orientations | 64 | 1101 | 660 | 210 | 79 | 16 | 35 |
| Â | Parallel | 30 | 541 | 331 | 107 | 48 | 14 | 23 |
| Â | Divergent | 18 | 237 | 167 | 51 | 17 | 1 | 6 |
| Â | Convergent | 16 | 323 | 162 | 52 | 14 | 1 | 6 |
Analyzed w/o tandem duplicates | All orientations | 63 | 1073 | 586 | 169 | 83 | 14 | 19 |
| Â | Parallel | 27 | 518 | 291 | 89 | 49 | 12 | 9 |
| Â | Divergent | 17 | 244 | 152 | 41 | 18 | 1 | 5 |
| Â | Convergent | 19 | 311 | 143 | 39 | 16 | 1 | 5 |