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Table 1 BDNF-correlated genes conserved between human, mouse and rat.

From: Meta-coexpression conservation analysis of microarray data: a "subset" approach provides insight into brain-derived neurotrophic factor regulation

GO category Conserved correlated genes
protein tyrosine kinase PW * ANGPT1 BAIAP2 DUSP1 EPHA4 EPHA5 EPHA7 FGFR1 GAS6 KALRN IRS2 NTRK2  
  PTPRF FP106           
dendrite localization* DBN1 FREQ GRIA3 KCND2 NTRK2        
signal transduction* ANGPT1 CREM DUSP6 EPHA5 FGFR1 IGFBP5 KALRN NR4A2 PDE4B PRKAG2 PTPRF TBX3
  BAIAP2 CXCL5 EGR1 EPHA7 GAS6 IL6ST KLF10 NTRK2 PENK PRKCB RGS4 ZFP106
  COL11A1 DUSP1 EPHA4 FGF13 GRIA3 IRS2 MYH9 ODZ2 PLAUR PRKCE SCG2  
hsa-miR-369-3p* COL11A1 DBC1 DCN DUSP1 GAS6 ITF-2 KLF10 NEUROD6 PENK TRPC4   
TF: CCCGCCCCCRCCCC (KROX) * ATF3 ATP1B1 CCND2 COL11A1 DBN1 DLGAP4 EPHA7 GAS6 GRIA3 IL6ST IRS2 KCND2  
  KLF10 NFIA NPTXR PCSK2 SNCA THRA       
TF: GGGGAGGG (MAZ/SP1) * ATF3 CCND2 DBC1 DUSP6 FREQ ITF-2 MBP NPTXR PCSK1 PTGS2 THRA  
  BAIAP2 COL4A5 DBN1 EGR1 GRIA3 KALRN MDM2 NR4A2 PDE4B PTPRF TRPC4  
  BASP1 CREM DLGAP4 EPHA5 HN1 KLF10 NFIA NTRK2 PRKCB1 PURA VCAN  
  CAMK2D CXCL5 DUSP1 EPHA7 IRS2 LMO7 NPTX1 OLFM1 PRSS23 TBX3   
NS development* BAIAP2 EPHA4 FGF13 IRS2 MBP NEUROD6 NR4A2 OLFM1 PTPRF SMARCA4 TBX3  
  DBN1 EPHA7 FGFR1 KALRN NEFL NPTX1 NTRK2 PCSK2 PURA SNCA   
angiogenesis ANGPT1 BAIAP2 CYR61 MYH9 SCG2 SERPINE1 TBX3      
apoptosis/anti-apoptosis BIRC4 KLF10 NEFL PLAGL1 PRKCE SCG2 SNCA TBX3     
cell cycle CAMK2D CORO1A DUSP1 MDM2 MYH9 PPP3CA       
synaptic transmission/plasticity DBN1 KCND2 MBP NPTX1 NR4A2 SNCA       
  1. GO categories marked with a star (*) have been reported as statistically significant for this gene list by g:Profiler analysis tool. Human gene names are given representing mouse and rat orthologs whenever gene names for all three species are not the same. GO - gene ontology, PW - pathway, TF - transcription factor, NS - nervous system.