Table 3 Applications and the relevant data in the database
From: ZifBASE: a database of zinc finger proteins and associated resources
Database entries | Number/size of finger motifs | Framework Type/Class | Entry types | Output format |
|---|---|---|---|---|
Natural ZFP | 2 | C2H2 | Positions | Web Interface |
Natural ZFP | 2 | C2H2 | Counts | Web Interface |
Natural ZFP | 3-13 | CXXC and PHD | Positions | Web Interface |
Natural ZFP | 3-13 | CXXC and PHD | Counts | Web Interface |
Engineered ZFP | 3 | Sp1/C2H2 | Positions | Web Interface |
Engineered ZFP | 3 | Sp1/C2H2 | Counts | Web Interface |
Engineered ZFP | 3, 4, 6 | Zif 268/C2H2 | Positions | Web Interface |
Engineered ZFP | 3, 4, 6 | Zif 268/C2H2 | Counts | Web Interface |
Engineered ZFP | 3, 6 | Sp1c/C2H2 | Positions | Web Interface |
Engineered ZFP | 3, 6 | Sp1c/C2H2 | Counts | Web Interface |
Engineered ZFP | 6 | Sp1c-zif268/C2H2 | Positions | Web Interface |
Engineered ZFP | 6 | Sp1c-zif268/C2H2 | Counts | Web Interface |