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Table 2 Full-length cDNA sequences identified with EuGène'Hom.

From: Comparative EST transcript profiling of peach fruits under different post-harvest conditions reveals candidate genes associated with peach fruit quality

Category Consensus Sequence Structurea Average Lengthb Maximum Lengthb Minimum Lengthb # Contigs
1 5' UTR - ORF - 3'UTR 970 2,715 376 614
2 5' UTR - ORF 832 2,579 388 1,109
3 5' UTR 705 1,670 384 115
4 ORF - 3'UTR 900 2,670 241 782
5 ORF 834 3,082 149 1,117
6 3'UTR 709 1,334 109 220
7 NA c 936 2,323 525 212
  Total     4,169
  1. a The structure of the contig consensus sequence were analyzed using EuGène'Hom [21]. The results of this analysis were divided into 7 categories, 1: Full-length (5' UTR - ORF - 3'UTR; 2: Putative Full-length (5' UTR - ORF); 3: only 5' UTR; 4: only ORF - 3'UTR; 5: only ORF; 6: only 3'UTR; 7: none of the previous mentioned structures.
  2. b base pairs
  3. c NA: No identifiable structures