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Table 2 Full-length cDNA sequences identified with EuGène'Hom.

From: Comparative EST transcript profiling of peach fruits under different post-harvest conditions reveals candidate genes associated with peach fruit quality

Category

Consensus Sequence Structurea

Average Lengthb

Maximum Lengthb

Minimum Lengthb

# Contigs

1

5' UTR - ORF - 3'UTR

970

2,715

376

614

2

5' UTR - ORF

832

2,579

388

1,109

3

5' UTR

705

1,670

384

115

4

ORF - 3'UTR

900

2,670

241

782

5

ORF

834

3,082

149

1,117

6

3'UTR

709

1,334

109

220

7

NA c

936

2,323

525

212

 

Total

   

4,169

  1. a The structure of the contig consensus sequence were analyzed using EuGène'Hom [21]. The results of this analysis were divided into 7 categories, 1: Full-length (5' UTR - ORF - 3'UTR; 2: Putative Full-length (5' UTR - ORF); 3: only 5' UTR; 4: only ORF - 3'UTR; 5: only ORF; 6: only 3'UTR; 7: none of the previous mentioned structures.
  2. b base pairs
  3. c NA: No identifiable structures