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Table 4 Correlation between the presence of anchoring motifsa (AM) in the natural cognate protein and measured extracellular NucA activities.

From: Genome-wide analysis of signal peptide functionality in Lactobacillus plantarum WCFS1

 

All SPs

SPs 1-39b

SPs 40-78c

SPs with AM/Total number of SPs

41/78

16/39

25/39

SPs without AM (%)

47

59

36

  1. aInvestigated anchoring motifs: LPxTG, LysM domain and C-terminal
  2. transmembrane domain, as annotated by the Secretome
  3. database of L. plantarum [18]http://www.cmbi.ru.nl/secretome.
  4. bThe best performing half of the SPs
  5. cThe least performing half of the SPs
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BMC Genomics

ISSN: 1471-2164

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