Table 1 Plant material used in each individual cDNA library, either full-length or full-length and normalized.
Library | Species | Treatment | Tissue | Developmental stage |
|---|---|---|---|---|
Full-length enriched libraries | ||||
AbioticL1 | C clementina | Several abiotic stresses* | Leaves | Adult |
AbioticR1 | C reshni | Several abiotic stresses* | Roots | Young |
BiotPhyR1 | C aurantium | Infection with the oomycete Phytophthora citrophthora | Roots | Young |
CTVMacrop1 | C macrophylla | Infection with the Citrus tristeza virus (CTV) | Leaves | Adult |
CTVClemen1 | C clementina | Infection with the Citrus tristeza virus (CTV) | Shoot | Adult |
CEVdCidro1 | C medica | Infection with the Citrus exocortis viroid (CEVd) | Leaves | Adult |
HSVdMacro1 | C macrophylla | Infection with HSVd | Leaves | Adult |
DevOvary1 | C clementina | Normal culture conditions | Ovaries | Adult |
RVDevelop1 | C clementina | Normal culture conditions | Leaves, flowers, ovaries and apical meristems | Adult |
PostharvC1 | C clementina | Cold stress over harvested fruit | Mature fruit (flavedo) | Adult |
PostharvP1 | C clementina | Infection with the fungus Penicillium digitatum | Mature fruit (flavedo and albedo) | Adult |
Normalized and full-length enriched libraries | ||||
RVDevelopN | C clementina | Normal culture conditions | Leaves, flowers, ovaries and apical meristems | Adult |
StrClemenN | C clementina | Several abiotic stresses* Infection with the Citrus tristeza virus (CTV) | Abiotic stress: Leaves Biotic stress: Shoots | Adult |
StrCleopN | C reshni | Several abiotic stresses* Infection with the oomycete Phytophthora citrophthora | Roots | Young |
PostharveN | C clementina | Cold stress over harvested fruit Infection with the fungus Penicillium digitatum | Abiotic stress: Fruits (flavedo) Biotic stress: Fruits (flavedo + albedo). | Adult |