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Table 1 Overview of data sets in Example 1 and 2

From: Relative power and sample size analysis on gene expression profiling data

Experiment

Genes

group A1

group B

strong, 6 hours

16539

4 (wild-type)

4 (null)

intermediate, 6 hours

16539

4 (wild-type)

5 (null)

weak, 6 hours

16539

5 (wild-type)

5 (null)

strong, 5 days

16539

4 (wild-type)

4 (null)

weak, 5 days

16539

4 (wild-type)

4 (null)

Affymetrix

45101

5 (wild-type)

5 (transgenic)

Agilent

41232

5 (wild-type)

5 (transgenic)

Illumina

46120

5 (wild-type)

5 (transgenic)

home-spotted

21771

5 (wild-type)

5 (transgenic)

Solexa/Illumina

34477

4 (wild-type)

4 (transgenic)

  1. 1 The sample size given refer to the number of biologically independent samples.