Table 2 Xylose utilisation metabolic genes with significantly higher expression on xylose compared to maltose.
ORF | gene name | encoded enzyme (homolog) | fold difference | signal xylose | SD | Signal maltose | SD | p | FDR |
|---|---|---|---|---|---|---|---|---|---|
Xylose conversion: | |||||||||
An01g03740 | xyrA | D-xylose reductase | 15.9 | 9,267 | 511 | 1,048 | 1,033 | 4.1·10-3 | 4.5·10-2 |
An07g03140 | xylulokinase (Xks1 – S. cerevisiae) | 16.0 | 916 | 103 | 58 | 34 | 2.3·10-5 | 1.3·10-3 | |
Pentose phosphate pathway – nonoxidative phase: | |||||||||
An08g06570 | transketolase (Tkl1 – S. cerevisiae) | 1.4 | 5,410 | 439 | 3,522 | 448 | 1.6·10-4 | 4.7·10-3 | |
An07g03850 | transaldolase (Tal1 – S. cerevisiae) | 1.4 | 5,127 | 615 | 3,257 | 566 | 1.6·10-4 | 4.7·10-3 | |
An07g03160 | transaldolase (TalB – Synechocystis sp.) | 8.9 | 551 | 32 | 60 | 26 | 2.1·10-5 | 1.2·10-3 | |
Glycolysis/gluconeogenesis: | |||||||||
An16g05420 | glucose-6-phosphate isomerase (Pgi1 – S. cerevisiae) | 1.7 | 1,481 | 278 | 789 | 61 | 2.5·10-3 | 3.2·10-2 | |
Pentose phosphate pathway – oxidative phase: | |||||||||
An02g12140 | gsdA | glucose-6-phosphate dehydrogenase | 1.5 | 1,588 | 159 | 966 | 111 | 4.5·10-5 | 2.0·10-3 |