Identification of novel androgen-responsive genes by sequencing of LongSAGE libraries

BMC Genomics

Table 9 Genes with confirmed or potential AREs that change expression in response to androgen

HGNC Gene Symbol	Access. No.	Expression change by R1881 stimulation	Chromosome	Distance of the ARE from TSS* (bp)	Reference
Conventional
B2M	NM_004048	2.3	15	-1902	[42]
NKX3-1	NM_006167	20	8	-3013	[42]
KLK3	NM_001648	7.3	19	-170	[16, 48]
				-4006
				-4075
				-4115
FKBP5	NM_004117	20	6	65.6 k (Intron 5)	[47]
NDRG1	NM_006096	70	8	-984	[45]
TMEPAI	NM_020182	20	20	-2134	[45]
TMPRSS 2	NM_005656	10	21	-148	[46]
TPD52	NM_005079	4	8	-359	[49]
Identified by ChIP-Chip
BLVRB	NM_000713	2.1	19	-56.7 k	[51]
C19orf48	NM_199249	3.1	19	-363 k	[51]
CAPNS1	NM_001003962	2.5	19	-165 k	[51]
HM13	NM_178580	20	20	-330 k	[51]
ADAMTS 1	NM_006988	4.2	21	276 k	[50]
				310 k
				481 k
TMPRSS 2	NM_005656	10	21	-1063 k	[50]
				-462 k
				13.5 k
SOD1	NM_000454	-2.1	21	-496 k	[50]
Potential based on the sequence
B2M	NM_004048	2.3	15	-440	[52]
NDRG1	NM_006096	70	8	-1018	[52]
NKX3-1	NM_006167	20	8	-1272	[52]
SORD	NM_003104	5.1	15	-1995	[52]
TMEPA I	NM_020182	20	20	-225	[52]
TMPRSS 2	NM_005656	10	21	-771	[52]
TPD52	NM_005079	4	8	-609	[52]
TSC22D 1	NM_006022	6	13	-1711	[52]

ISSN: 1471-2164