Skip to main content

Table 5 SNP performance statistics.

From: Large scale single nucleotide polymorphism discovery in unsequenced genomes using second generation high throughput sequencing technology: applied to turkey

SNP performance

384 selected SNPs

 

Mapped (343)

%

Unmapped (41)

%

polymorphic

304

88.6

20

48.8

monomorphic

12

3.5

4

9.8

not working

27

7.9

17

41.5

  1. Genotyping performance of 343 SNP discovered in short read contigs that were uniquely mapped on the chicken genome and 41 SNPs discovered in contigs that were not, or not uniquely, mapped on the chicken genome.
Back to article page

BMC Genomics

ISSN: 1471-2164

Contact us