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Table 2 The 50 most highly expressed protein-coding genes

From: Widespread variation in transcript abundance within and across developmental stages of Trypanosoma brucei

Rank

name

Gene #a

Description

Max

Max_stageb

1

Tb927.1.4620

1

hypothetical conserved

64153

cBF

2

Tb927.8.7410

1

calreticulin

56648

slender BF

3

Tb927.1.2380

4

alpha tubulin

55277

slender BF

4

Tb10.6k15.0020

1

EP1 procyclin

53583

PF-stat

5

Tb927.6.510

1

GPEET2 procyclin precursor

52410

PF-log*

6

Tb927.4.5010

1

calreticulin

51616

cBF*

7

Tb927.1.2350

4

beta tubulin

50396

PF-log

8

Tb10.70.1370

1

fructose-bisphosphate aldolase glycosomal

50161

slender BF*

9

Tb10.406.0390

11

histone H2B

49321

slender BF

10

Tb927.5.2260

1

hypothetical conserved

49312

PF-log*

11

Tb927.1.2560

7

hypothetical

49217

PF-log

12

Tb11.02.4690

1

Hypothetical

48922

cBF

13

Tb10.6k15.2040

1

glucose transporter 1B

48339

slender BF*

14

Tb11.1190

1

hypothetical

48183

cBF

15

Tb927.1.4600

5

F-box motif protein, CFB1A-1E

47725

cBF*

16

Tb927.8.4710

3

amino acid transporter

47553

slender BF

17

Tb927.8.4700

2

amino acid transporter

47452

stumpy BF

18

Tb927.1.2530

7

histone H3

47213

slender BF

19

Tb927.4.4730

1

amino acid transporter

46274

PF-stat*

20

Tb11.01.3110

1

heat shock protein 70

45565

PF-log

21

Tb11.01.7800

1

nucleoside diphosphate kinase

45393

PF-log

22

Tb927.5.1810

1

p67 lysosomal membrane glycoprotein

44412

stumpy BF

23

Tb927.7.6040

2

Hypothetical

44288

slender BF

24

Tb927.8.5260

1

60S ribosomal protein L39

44187

PF-stat

25

Tb10.406.0360

2

histone H2B

44099

slender BF*

26

Tb11.01.0355

1

ribosomal protein S26

43926

PF-stat

27

Tb927.7.2930

13

histone H2A

43798

slender BF

28

Tb09.160.5400

1

ESAG9

43669

stumpy BF*

29

Tb10.70.5650

3

elongation factor 1-alpha TEF1

43424

cBF

30

Tb09.244.2740

2

60S ribosomal protein L5

42964

PF-log

31

Tb927.8.8300

1

amino acid transporter

42640

PF-stat*

32

Tb10.70.3370

2

40S ribosomal protein S3a

42603

stumpy BF

33

Tb10.26.1080

1

heat shock protein 83

42429

PF-log

34

Tb927.1.580

1

phosphate-repressible phosphate permease

42138

PF-stat

35

Tb927.6.970

9

cysteine peptidase precursor

41870

slender BF

36

Tb927.5.810

1

hypothetical conserved, zinc finger protein

41840

stumpy BF

37

Tb10.6k15.0030

1

EP2 procyclin

41304

PF-stat*

38

Tb10.6k15.2020

1

glucose transporter 2A

40774

PF-stat

39

Tb10.v4.0052

1

microtubule-associated protein 2

40337

cBF

40

Tb09.211.0340

2

60S ribosomal protein L10

40302

PF-stat

41

Tb10.70.2650

2

elongation factor 2

39867

PF-log*

42

Tb927.4.1860

1

ribosomal protein S19

39840

PF-stat

43

Tb927.8.5460

3

flagellar calcium-binding protein 44 kDa

39840

cBF

44

Tb927.4.1800

2

ribosomal protein L3 mitochondrial

39831

PF-stat

45

Tb927.8.6180

1

60S ribosomal protein L26

39793

stumpy BF

46

Tb927.8.6450

1

inhibitor of cysteine peptidase chagasin

39785

stumpy BF*

47

Tb11.01.3180

2

guanine nucleotide-binding protein beta subunit-like

39559

PF-log

48

Tb927.5.1710

1

ribonucleoprotein p18, complex V

39457

PF-log

49

Tb10.406.0340

1

histone H2B

39390

cBF

50

Tb927.1.2310

1

Hypothetical

39078

PF-stat*

  1. anumber of genes detected by probe set
  2. bAsterisk indicates gene is regulated at least two-fold between highest and lowest sample sets.