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Table 4 Match of full and half CRE consensus sites in CREB HaloCHIP-chip data.

From: A functional analysis of the CREB signaling pathway using HaloCHIP-chip and high throughput reporter assays

Categories

% with Full CRE site

% with Half CRE Site

Top 1%

22%

89%

Top 5%

12%

86%

Bottom 90%

3%

57%

  1. CREB HaloCHIP-chip promoters from the Top 1%, Top 5%, and Bottom 90% categories were analyzed for the presence of the full CRE or half CRE consensus site and number of promoters containing these sequences are depicted. A full CRE site was defined as a perfect match to the consensus TGACGTCA. A half CRE site was defined as a perfect match to the consensus TGACG or CGTCA.
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BMC Genomics

ISSN: 1471-2164

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