Skip to main content

Table 1 Data Content in Fourmidable (October 2008)

From: Fourmidable: a database for ant genomics

Solenopsis invicta:
   28,006 input sequences including:
• Tracefiles from 21,715 ESTs (some were multiply sequenced)
• 1,496 additional ESTs and mRNA sequences from GenBank
   12,859 putative transcripts:
• 4,958 contigs
• 7,263 singlets
   Sequence annotation:
• 14,222 annotating GO terms on 2,818 putative transcripts
• 599 Interproscan annotations
• Blast comparisons against the non-redundant protein database, as well as proteomes and genomes of Apis mellifera, Anopheles gambiae and Drosophila melanogaster.
   Microarray data:
• Two public experiments
• 66 hybridizations
Lasius niger:
   709 input sequences which are:
• Tracefiles from 615 EST clones
   403 putative transcripts:
• 147 contigs
• 256 singlets
   21 Interproscan annotations
General:
   8 molecular biology protocols